RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 M0R1B8 84 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 NME4O00746 187 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 PLPP3O14495 311 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 SNX3O60493 162 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 SOD3P08294 240 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 DANCRP0C864 163 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 LSP1P33241 339 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 PTH2RP49190 550 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 LIPEQ05469 1076 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 SPOCK1Q08629 439 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 PMS2P3Q13401 168 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 PHYHD1Q5SRE7 291 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 SHEQ5VZ18 495 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 UEVLDQ8IX04 471 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 TMEM123Q8N131 208 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 OR1K1Q8NGR3 316 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 OR2M2Q96R28 347 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 EFCAB1Q9HAE3 211 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 DLL4Q9NR61 685 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 BAG5Q9UL15 447 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
SSR4-203ENST00000370086 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 RPL36A-HNRNPH2H7BZ11 118 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 KPNA4O00629 521 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 SLC43A1O75387 559 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 CH25HO95992 272 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 IFNA14P01570 189 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 PAX1P15863 534 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 PTAFRP25105 342 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 CD40P25942 277 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 SLC7A2P52569 658 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 PRPS1P60891 318 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 ROR2Q01974 943 aaKnown RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 POU3F1Q03052 451 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 PUDPQ08623 228 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 PIN1Q13526 163 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 ZNF74Q16587 644 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 TBRG1Q3YBR2 411 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 Q5PR19 223 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 KLHL17Q6TDP4 642 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 DEF8Q6ZN54 512 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 LRRC17Q8N6Y2 441 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 OR5J2Q8NH18 312 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 SMAP2Q8WU79 429 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 BCL2L2Q92843 193 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 ZNF837Q96EG3 531 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 TPD52L3Q96J77 140 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 NELFAQ9H3P2 528 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 MEPEQ9NQ76 525 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 ZNF701Q9NV72 531 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 MED29Q9NX70 200 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 CISD1Q9NZ45 108 aaKnown RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
SSR4-203ENST00000370086 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
SSR4-203ENST00000370086 C11orf98E9PRG8 122 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 AHCYP23526 432 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 NUDT2P50583 147 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 CDH11P55287 796 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 TAS2R41P59536 307 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 GNGT1P63211 74 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 SELENOWP63302 87 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 CARD17Q5XLA6 110 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 HACD2Q6Y1H2 254 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
SSR4-203ENST00000370086 CXorf56Q9H5V9 222 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 RIMS3Q9UJD0 308 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 MGAT4BQ9UQ53 548 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 NOX1Q9Y5S8 564 aa12.65□□□□□ -0.38
SSR4-203ENST00000370086 FLNAP21333 2647 aaKnown RBP12.65□□□□□ -0.38
SSR4-203ENST00000370086 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 A0A096LPE4 126 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 A0A1W2PPZ6 126 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 E7EQL1 145 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 OVOL3O00110 214 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 CXCR6O00574 342 aa12.64□□□□□ -0.39
SSR4-203ENST00000370086 AKAP8O43823 692 aaKnown RBP12.64□□□□□ -0.39
SSR4-203ENST00000370086 TMCC2O75069 709 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms