RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TRIP10Q15642 601 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 MEX3DQ86XN8 651 aaKnown RBP13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 ADGRG5Q8IZF4 528 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 PQLC1Q8N2U9 271 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 LRTOMTQ8WZ04 291 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 APH1AQ96BI3 265 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 OXGR1Q96P68 337 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 CORINQ9Y5Q5 1042 aa13.33□□□□□ -0.28
SMPDL3A-201ENST00000368440 SH3D21A4FU49 640 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 C16orf97H3BN30 126 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 FUT1P19526 365 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 PCYT1AP49585 367 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 SELENOPP49908 381 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 IL1RL1Q01638 556 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 LGALS3BPQ08380 585 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 PMS2P3Q13401 168 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 TRAM2Q15035 370 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 TSPO2Q5TGU0 170 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 Q6ZT83 130 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 AAED1Q7RTV5 226 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 WDFY1Q8IWB7 410 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 PIK3C3Q8NEB9 887 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 OR5J2Q8NH18 312 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 HS6ST2Q96MM7 605 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 WFIKKN1Q96NZ8 548 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 FKRPQ9H9S5 495 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 NMNAT1Q9HAN9 279 aaPredicted RBP13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 NANSQ9NR45 359 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 KCNN3Q9UGI6 736 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
SMPDL3A-201ENST00000368440 A0A087WUU8 490 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 PLPP3O14495 311 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 TRAF3IP2O43734 574 aaPredicted RBP13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 ASAH2BP0C7U1 165 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 PEX2P28328 305 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 IFNA8P32881 189 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 CLDN17P56750 224 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 TBPL2Q6SJ96 375 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 CYP4Z1Q86W10 505 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 UBE2J2Q8N2K1 259 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 SGTBQ96EQ0 304 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 ZNF229Q9UJW7 825 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 TESMINQ9Y4I5 508 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 C11orf98E9PRG8 122 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 LYZL6O75951 148 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 OR7A10O76100 309 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 UMPSP11172 480 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 ZNF43P17038 809 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 RHCEP18577 417 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 PSMB1P20618 241 aaKnown RBP13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 VHLP40337 213 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 PEX19P40855 299 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 POU3F1Q03052 451 aaPredicted RBP13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 PUDPQ08623 228 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 SFRP5Q5T4F7 317 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 NIPAL3Q6P499 406 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 NHLRC1Q6VVB1 395 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 NRMQ8IXM6 262 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 TAS2R5Q9NYW4 299 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 MALT1Q9UDY8 824 aa13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 ANKHD1Q8IWZ3 2542 aaKnown RBP13.31□□□□□ -0.28
SMPDL3A-201ENST00000368440 LOC102725191A0A1B0GVB3 256 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 SERPINI2O75830 405 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 FABP3P05413 133 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 IFI30P13284 250 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 COX5AP20674 150 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 MAKP20794 623 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 AHCYP23526 432 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 TLE4Q04727 773 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 FAPQ12884 760 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 UEVLDQ8IX04 471 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 SLC7A13Q8TCU3 470 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 FAM222BQ8WU58 562 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 ACOT11Q8WXI4 607 aaPredicted RBP13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 TXNDC15Q96J42 360 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 ACTR6Q9GZN1 396 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 PARPBPQ9NWS1 579 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 MED29Q9NX70 200 aa13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
SMPDL3A-201ENST00000368440 TRBV4-1A0A0J9YWV2 114 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 ZNF432O94892 652 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 IGF2P01344 180 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 THBDP07204 575 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 EPXP11678 715 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 ITGADQ13349 1161 aa13.29□□□□□ -0.28
SMPDL3A-201ENST00000368440 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms