RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ORAI3Q9BRQ5 295 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 SPRTNQ9H040 489 aaPredicted RBP13.03□□□□□ -0.32
CD48-201ENST00000368045 UCK1Q9HA47 277 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 TCF7L1Q9HCS4 588 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 FOXJ3Q9UPW0 622 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
CD48-201ENST00000368045 ANKRD20A5PA0PJZ0 165 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 UPK3AO75631 287 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 IL33O95760 270 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 CLPSP04118 112 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 THEGLP0DJG4 465 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 LCN1P31025 176 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 UQCRC1P31930 480 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 PTH2RP49190 550 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 BTG2P78543 158 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 SKP2Q13309 424 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 CCINQ13939 588 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 ALG10Q5BKT4 473 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 GPR139Q6DWJ6 353 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 FCRLAQ7L513 359 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 CDC20BQ86Y33 519 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 TIGD4Q8IY51 512 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 ZNF433Q8N7K0 673 aaPredicted RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 ZNF680Q8NEM1 530 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 OR2T4Q8NH00 348 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 OR52I2Q8NH67 350 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 FAM174AQ8TBP5 190 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 NXPE2Q96DL1 559 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 MAP6Q96JE9 813 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 SLC25A18Q9H1K4 315 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.32
CD48-201ENST00000368045 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 MMP25Q9NPA2 562 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 AUP1Q9Y679 476 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 TMEM14AQ9Y6G1 99 aa13.02□□□□□ -0.32
CD48-201ENST00000368045 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 A0A1B0GVT2 93 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 BLOC1S5-TXNDC5H3BN57 136 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 ACOT7O00154 380 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 SCDO00767 359 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 PHYHO14832 338 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 TSC22D2O75157 780 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 CDC123O75794 336 aaPredicted RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 ABHD16AO95870 558 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 ADRB1P08588 477 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 ASAH2BP0C7U1 165 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 HPGDP15428 266 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 MAOAP21397 527 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 DNASE1P24855 282 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 ART1P52961 327 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 CTXN1P60606 82 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 SHHQ15465 462 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 NNATQ16517 81 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 GXYLT1Q4G148 440 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 C10orf53Q8N6V4 93 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 OR11G2Q8NGC1 345 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 OR11H4Q8NGC9 324 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 MIB2Q96AX9 1013 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 ADAD1Q96M93 576 aaKnown RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 ZNF436Q9C0F3 470 aaPredicted RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 HEXA-AS1Q9H8Q6 139 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 OR5V1Q9UGF6 321 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 MRM2Q9UI43 246 aaKnown RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 MRTO4Q9UKD2 239 aaKnown RBP13.02□□□□□ -0.33
CD48-201ENST00000368045 PLCL2Q9UPR0 1127 aa13.02□□□□□ -0.33
CD48-201ENST00000368045 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
CD48-201ENST00000368045 LEUTXA8MZ59 168 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 PRR32B1ATL7 298 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 IDSB3KWA1 339 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 H0YIG0 161 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
CD48-201ENST00000368045 IFNA7P01567 189 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 C4BPBP20851 252 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 PPICP45877 212 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 CAPZBP47756 277 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 SLC6A8P48029 635 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
CD48-201ENST00000368045 EGR3Q06889 387 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 TCTE1Q5JU00 501 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 STAC2Q6ZMT1 411 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 DNM1P46Q6ZS02 220 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 MED25Q71SY5 747 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 PARGQ86W56 976 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 SPICQ8N5J4 248 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 C1orf216Q8TAB5 229 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms