RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 IGLV3-16A0A075B6K0 115 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.41□□□□□ -0.42
LDB3-202ENST00000361373 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 SLC34A2O95436 690 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 TK1P04183 234 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 LTBQ06643 244 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 OR4M2Q8NGB6 313 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 RHOXF1Q8NHV9 184 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 CCL4L1Q8NHW4 92 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 ITFG2Q969R8 447 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 TEX37Q96LM6 180 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 CALHM2Q9HA72 323 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 B3GAT1Q9P2W7 334 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 CCDC187A0A096LP49 1063 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 CAPNS1P04632 268 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 SCG5P05408 212 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 TPOP07202 933 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 RPL27P61353 136 aaKnown RBP12.41□□□□□ -0.42
LDB3-202ENST00000361373 FCRL6Q6DN72 434 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 OR4K15Q8NH41 348 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 TTC9Q92623 222 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 SLC35A4Q96G79 324 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 CCDC86Q9H6F5 360 aaKnown RBP12.41□□□□□ -0.42
LDB3-202ENST00000361373 NRIP3Q9NQ35 241 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 MLXQ9UH92 298 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
LDB3-202ENST00000361373 HMGN4O00479 90 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 DVL2O14641 736 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 B4GAT1O43505 415 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 SEC14L2O76054 403 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 KCNAB1Q14722 419 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 TSSK4Q6SA08 328 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 NPSR1Q6W5P4 371 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 SARAFQ96BY9 339 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
LDB3-202ENST00000361373 G3V3Y1 287 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 I3L521 148 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 MBTPS2O43462 519 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 SLC22A5O76082 557 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 B3GALT4O96024 378 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 MT-CO2P00403 227 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 KNG1P01042 644 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 GABRR1P24046 479 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 CHRNB4P30926 498 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 IL2RGP31785 369 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 CX3CR1P49238 355 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 MTNR1BP49286 362 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 MTCP1P56278 107 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 FXYD4P59646 89 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 LRRC18Q8N456 261 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 BCORP1Q8N888 145 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 MPPED1O15442 326 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 LCMT2O60294 686 aaKnown RBP12.4□□□□□ -0.42
LDB3-202ENST00000361373 KCNK2O95069 426 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 UBBP0CG47 229 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 OPRL1P41146 370 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 AGAP7PQ5VUJ5 663 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 SLC16A9Q7RTY1 509 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 AGAP4Q96P64 663 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 PRRX2Q99811 253 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 ARRDC1-AS1Q9H2J1 176 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 A0A087WZY1 265 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 PRAMEF27A3QJZ7 478 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 C7orf72A4D263 438 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 PMS2P1A4D2B8 440 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 A6NHS1 94 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 PIAS2O75928 621 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 ZNF628Q5EBL2 1059 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 OR2G6Q5TZ20 316 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.42
LDB3-202ENST00000361373 NRSN2Q9GZP1 204 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 UNKLQ9H9P5 680 aaKnown RBP12.4□□□□□ -0.42
LDB3-202ENST00000361373 FAIMQ9NVQ4 179 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 ZNF780AO75290 641 aaPredicted RBP12.4□□□□□ -0.42
LDB3-202ENST00000361373 SEC61A1P61619 476 aaKnown RBP12.4□□□□□ -0.42
LDB3-202ENST00000361373 CXADRP78310 365 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 SQSTM1Q13501 440 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 UBE2NLQ5JXB2 153 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 CLVS2Q5SYC1 327 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 BHLHA9Q7RTU4 235 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 SULF2Q8IWU5 870 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
LDB3-202ENST00000361373 RNF212BA8MTL3 300 aa12.39□□□□□ -0.43
LDB3-202ENST00000361373 MCRIP1C9JLW8 97 aa12.39□□□□□ -0.43
LDB3-202ENST00000361373 TSPAN12O95859 305 aa12.39□□□□□ -0.43
LDB3-202ENST00000361373 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms