RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CEACAM4O75871 244 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 SLC2A10O95528 541 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 CD46P15529 392 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 JUNBP17275 347 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 GDF1P27539 372 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ERVK-25P63136 954 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ARG2P78540 354 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 CRMP1Q14194 572 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 OR7A5Q15622 319 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 NEDD8Q15843 81 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 NADK2Q4G0N4 442 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 GPR139Q6DWJ6 353 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 NIPAL3Q6P499 406 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 BCDIN3DQ7Z5W3 292 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 CPOQ8IVL8 374 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 FAM98AQ8NCA5 519 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 OR5M1Q8NGP8 315 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 C9orf43Q8TAL5 461 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 DNAJA3Q96EY1 480 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ARL5BQ96KC2 179 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 PSMG3-AS1Q96PY0 264 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 SIGLEC11Q96RL6 698 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF587Q96SQ5 575 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 OR2B2Q9GZK3 357 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 FAM192AQ9GZU8 254 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF552Q9H707 407 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 CHST11Q9NPF2 352 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 KLHL1Q9NR64 748 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 INIPQ9NRY2 104 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 RPH3AQ9Y2J0 694 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 MRPS18CQ9Y3D5 142 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 HDGFL3Q9Y3E1 203 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ADAM18Q9Y3Q7 739 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 BOD1L1Q8NFC6 3051 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 LIPT2A6NK58 231 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 GJE1A6NN92 205 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 K7ENP7 123 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 EFNA2O43921 213 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 NME2P1O60361 137 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 FADS2O95864 444 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SP1P08047 785 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 STSP08842 583 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 IMPDH2P12268 514 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 HIST1H1CP16403 213 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 IL11P20809 199 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 NME2P22392 152 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 ACVR2AP27037 513 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 HTR1FP30939 366 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SDHAP31040 664 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 ST3GAL4Q11206 333 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 MYBPHQ13203 477 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 ITGADQ13349 1161 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 TBCEQ15813 527 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 ARMC4Q5T2S8 1044 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SLC25A25Q6KCM7 469 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 INO80CQ6PI98 192 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 GPR141Q7Z602 305 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 JAZF1Q86VZ6 243 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 TMEM178AQ8NBL3 297 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 SLC37A3Q8NCC5 494 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 FDCSPQ8NFU4 85 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 OR14L1PQ8NHC6 308 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 TM9SF4Q92544 642 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 FCGR1BQ92637 280 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 HAS2Q92819 552 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 OTULINQ96BN8 352 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 OR5B2Q96R09 309 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 TUBA1CQ9BQE3 449 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 TMEM185BQ9H7F4 350 aa12.45□□□□□ -0.42
PDLIM5-203ENST00000359265 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 OR2M5A3KFT3 312 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 SLC22A31A6NKX4 558 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 FAM183AA6NL82 134 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 C11orf98E9PRG8 122 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 KLRC4-KLRK1H3BQV0 150 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 PLPP3O14495 311 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RNF13O43567 381 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 RAB36O95755 333 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 TXNDC12O95881 172 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 IGHMP01871 453 aa12.44□□□□□ -0.42
PDLIM5-203ENST00000359265 F13BP05160 661 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms