RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ITGAMP11215 1152 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 PPT1P50897 306 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 UBE2G1P62253 170 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 TAZQ16635 292 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 CATSPERDQ86XM0 798 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 IKZF5Q9H5V7 419 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 CBLCQ9ULV8 474 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 EPOP01588 193 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 OSMP13725 252 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 WNT4P56705 351 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 MEF2DQ14814 521 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF626Q68DY1 528 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 RAB3CQ96E17 227 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 IMP4Q96G21 291 aaKnown RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 C20orf24Q9BUV8 137 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 UBQLN4Q9NRR5 601 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 INTS6Q9UL03 887 aaKnown RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 HHLA2Q9UM44 414 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 KIAA2026Q5HYC2 2103 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 TOX4O94842 621 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 TLE4Q04727 773 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 DUSP7Q16829 419 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 PTCRAQ6ISU1 281 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 GAL3ST2Q9H3Q3 398 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 C1orf123Q9NWV4 160 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 B3GAT1Q9P2W7 334 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ADAM12O43184 909 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 NME2P22392 152 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 HOXD12P35452 270 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 MEOX1P50221 254 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 HLCSP50747 726 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 SLC30A7Q8NEW0 376 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 OR6T1Q8NGN1 323 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 NEIL2Q969S2 332 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF443Q9Y2A4 671 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 PMS2P1A4D2B8 440 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ACKR1Q16570 336 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ABHD4Q8TB40 342 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 FGF13Q92913 245 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 FAM103A1Q9BTL3 118 aaKnown RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 DHCR7Q9UBM7 475 aaKnown RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 MYOFQ9NZM1 2061 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 GAPDHSO14556 408 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-201ENST00000356083 OR4F15Q8NGB8 312 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 KATNB1Q9BVA0 655 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 FETUBQ9UGM5 382 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 ZNFX1Q9P2E3 1918 aaKnown RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ABCD4O14678 606 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 OR1D5P58170 312 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 FOXC1Q12948 553 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 OR1Q1Q15612 314 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 UNC50Q53HI1 259 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 PDZD11Q5EBL8 140 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF317Q96PQ6 595 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 VWA2Q5GFL6 755 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 WBP2NLQ6ICG8 309 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 FCRLAQ7L513 359 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 RASD1Q9Y272 281 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ANTXRLA6NF34 631 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 PSMB5P28074 263 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 OPN5Q6U736 354 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 GPRIN1Q7Z2K8 1008 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 OR1N1Q8NGS0 311 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 OR4Q3Q8NH05 313 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 TMEM230Q96A57 120 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 THSD1Q9NS62 852 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 CSF1P09603 554 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 CEACAM7Q14002 265 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 HSF5Q4G112 596 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 PNPLA1Q8N8W4 532 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 GLCEO94923 617 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 MMP2P08253 660 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ADH4P08319 380 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 GLIS1Q8NBF1 620 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 PLPP5Q8NEB5 264 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 NT5DC2Q9H857 520 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 MITFO75030 526 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 SUB1P53999 127 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 CLDN8P56748 225 aa16.04■□□□□ 0.16
COL27A1-201ENST00000356083 CPEB3Q8NE35 698 aaKnown RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 ZFC3H1O60293 1989 aaKnown RBP16.04■□□□□ 0.16
COL27A1-201ENST00000356083 KCNK5O95279 499 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 TAGLN2P37802 199 aaKnown RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 OR7G3Q8NG95 312 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 TLCD1Q96CP7 247 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 IL26Q9NPH9 171 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 MYADML2A6NDP7 307 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 NPC1O15118 1278 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 CLDN12P56749 244 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 RAB6CQ53S08 254 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms