RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ATP13A2Q9NQ11 1180 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 STEAP1Q9UHE8 339 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 KCND3Q9UK17 655 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 MYH10P35580 1976 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 YKT6O15498 198 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 LYPD4Q6UWN0 246 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 SECTM1Q8WVN6 248 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-202ENST00000355133 NAA50Q9GZZ1 169 aaKnown RBP12.22□□□□□ -0.45
SCN8A-202ENST00000355133 PLCXD1Q9NUJ7 323 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 SSX4O60224 188 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 MTHFD2P13995 350 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 TSFMP43897 325 aaKnown RBP12.22□□□□□ -0.45
SCN8A-202ENST00000355133 CRMP1Q14194 572 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-202ENST00000355133 SLC37A2Q8TED4 501 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 RPL3LQ92901 407 aaKnown RBP12.22□□□□□ -0.45
SCN8A-202ENST00000355133 SLA2Q9H6Q3 261 aa12.22□□□□□ -0.45
SCN8A-202ENST00000355133 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 A0A1B0GX78 115 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 FAM166BA8MTA8 275 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 C1orf196B1AJZ1 125 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 ZNF814B7Z6K7 855 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 OR2T7P0C7T2 308 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 ELAVL4P26378 380 aaKnown RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 GABRA5P31644 462 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 F2RL1P55085 397 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 PM20D2Q8IYS1 436 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 OR2T27Q8NH04 317 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 A4GALTQ9NPC4 353 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 MED17Q9NVC6 651 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SDK1Q7Z5N4 2213 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 A0A1W2PS29 197 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 GPRIN2O60269 458 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 KITLGP21583 273 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SHC1P29353 583 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 BLVRBP30043 206 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 CYB561P49447 251 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 PAN3Q58A45 887 aaKnown RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SUMF2Q8NBJ7 301 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 GIMAP1Q8WWP7 306 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 RASD2Q96D21 266 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 NEURL3Q96EH8 262 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 THOC3Q96J01 351 aaKnown RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 FGF22Q9HCT0 170 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 PRAMEF25A6NGN4 478 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 GMDSO60547 372 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 IGHV3-9P01782 118 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 ADPRHP54922 357 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SORDQ00796 357 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 HSF5Q4G112 596 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 LGALS14Q8TCE9 139 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 GATA6Q92908 595 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 TMEM106AQ96A25 262 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-202ENST00000355133 SLC38A1Q9H2H9 487 aa12.21□□□□□ -0.45
SCN8A-202ENST00000355133 RNF212BA8MTL3 300 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF701M0R085 212 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-202ENST00000355133 FBXO24O75426 580 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 GABREP78334 506 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 SSX2Q16385 188 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF511Q8NB15 262 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 OR7G1Q8NGA0 311 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 CCDC74AQ96AQ1 378 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 PPA2Q9H2U2 334 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 NRIP3Q9NQ35 241 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 MYOTQ9UBF9 498 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 EDIL3O43854 480 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 NXPH2O95156 264 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 OMGP23515 440 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 HNF4GQ14541 408 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF77Q15935 545 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 PDLIM3Q53GG5 364 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-202ENST00000355133 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 SLC16A11Q8NCK7 471 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 ELP4Q96EB1 424 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 ASB16Q96NS5 453 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 NKX3-1Q99801 234 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-202ENST00000355133 HRH4Q9H3N8 390 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 LIN7BQ9HAP6 207 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 OSGIN1Q9UJX0 560 aa12.21□□□□□ -0.46
SCN8A-202ENST00000355133 CD1CP29017 333 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 CATR1Q13166 79 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 CHTF18Q8WVB6 975 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 ELSPBP1Q96BH3 223 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 KIR3DX1Q9H7L2 352 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 C7orf72A4D263 438 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms