RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SLC15A1P46059 708 aa14□□□□□ -0.17
CTSA-202ENST00000354880 SLC35A1P78382 337 aa14□□□□□ -0.17
CTSA-202ENST00000354880 KHDRBS1Q07666 443 aaKnown RBP eCLIP14□□□□□ -0.17
CTSA-202ENST00000354880 EMC4Q5J8M3 183 aa14□□□□□ -0.17
CTSA-202ENST00000354880 IGFL3Q6UXB1 125 aa14□□□□□ -0.17
CTSA-202ENST00000354880 LRRC69Q6ZNQ3 347 aa14□□□□□ -0.17
CTSA-202ENST00000354880 GID4Q8IVV7 300 aa14□□□□□ -0.17
CTSA-202ENST00000354880 ZADH2Q8N4Q0 377 aa14□□□□□ -0.17
CTSA-202ENST00000354880 CYB561A3Q8NBI2 242 aa14□□□□□ -0.17
CTSA-202ENST00000354880 SLC37A3Q8NCC5 494 aa14□□□□□ -0.17
CTSA-202ENST00000354880 LSM14AQ8ND56 463 aaKnown RBP14□□□□□ -0.17
CTSA-202ENST00000354880 ADPRHL1Q8NDY3 354 aa14□□□□□ -0.17
CTSA-202ENST00000354880 BBS1Q8NFJ9 593 aa14□□□□□ -0.17
CTSA-202ENST00000354880 PTP4A1Q93096 173 aa14□□□□□ -0.17
CTSA-202ENST00000354880 MYDGFQ969H8 173 aa14□□□□□ -0.17
CTSA-202ENST00000354880 BATF3Q9NR55 127 aa14□□□□□ -0.17
CTSA-202ENST00000354880 ZNF346Q9UL40 294 aaKnown RBP14□□□□□ -0.17
CTSA-202ENST00000354880 SNX5Q9Y5X3 404 aa14□□□□□ -0.17
CTSA-202ENST00000354880 IGF2RP11717 2491 aa14□□□□□ -0.17
CTSA-202ENST00000354880 ATMQ13315 3056 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 ALPK2Q86TB3 2170 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 A0A0J9YW62 118 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 ACOT7O00154 380 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 MRPS14O60783 128 aaKnown RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 PIPP12273 146 aaPredicted RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 ACVR2AP27037 513 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 CDH11P55287 796 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 CSNK2A1P68400 391 aaPredicted RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 ST3GAL4Q11206 333 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 BORAQ6PGQ7 559 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 PRSS48Q7RTY5 328 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 SPARTQ8N0X7 666 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 KDM8Q8N371 416 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 STX19Q8N4C7 294 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 TMEM99Q8N816 258 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 NMNAT3Q96T66 252 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 HCAR1Q9BXC0 346 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 TXNIPQ9H3M7 391 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 MED20Q9H944 212 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 FANCFQ9NPI8 374 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 TNRC6AQ8NDV7 1962 aaKnown RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 NCOR2Q9Y618 2525 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 A0A1W2PNV4 684 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 A0A1W2PRG6 482 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 M0R3G1 203 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 PLGP00747 810 aaPredicted RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 IGHMP01871 453 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 CDK1P06493 297 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 HLA-DOBP13765 273 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 POU3F2P20265 443 aaPredicted RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 RPL5P46777 297 aaKnown RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 MTNR1AP48039 350 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 NR1H2P55055 460 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 CLDN20P56880 219 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 KRR1Q13601 381 aaKnown RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 ACKR1Q16570 336 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 NIPAL3Q6P499 406 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 PAQR6Q6TCH4 344 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 ESPNLQ6ZVH7 1005 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 JAZF1Q86VZ6 243 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 FAM109AQ8N4B1 249 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 NPEPL1Q8NDH3 523 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 SIGLEC11Q96RL6 698 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 RAXQ9Y2V3 346 aa13.99□□□□□ -0.17
CTSA-202ENST00000354880 SPENQ96T58 3664 aaKnown RBP13.99□□□□□ -0.17
CTSA-202ENST00000354880 CACNA1AO00555 2505 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 TNFSF11O14788 317 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 EIF1BO60739 113 aaKnown RBP13.98□□□□□ -0.17
CTSA-202ENST00000354880 MT-ND2P03891 347 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 C21orf33P30042 268 aaPredicted RBP13.98□□□□□ -0.17
CTSA-202ENST00000354880 HTR1FP30939 366 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 CDKN2AP42771 156 aaKnown RBP13.98□□□□□ -0.17
CTSA-202ENST00000354880 STARP49675 285 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 P2RY4P51582 365 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 UCNP55089 124 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 RPL27P61353 136 aaKnown RBP13.98□□□□□ -0.17
CTSA-202ENST00000354880 SLC10A1Q14973 349 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 ZNF239Q16600 458 aaKnown RBP13.98□□□□□ -0.17
CTSA-202ENST00000354880 KLHL12Q53G59 568 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 MESTQ5EB52 335 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 LEG1Q6P5S2 330 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 KCTD8Q6ZWB6 473 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 PXKQ7Z7A4 578 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 GGNQ86UU5 652 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 OR51V1Q9H2C8 321 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 SLC6A15Q9H2J7 730 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 ACKR4Q9NPB9 350 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 ZNF407Q9C0G0 2248 aa13.98□□□□□ -0.17
CTSA-202ENST00000354880 OR6C68A6NDL8 312 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 AQP7P3A6NL99 342 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 H0YC42 278 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 MKRN2OSH3BPM6 223 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 EIF1AYO14602 144 aaKnown RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 XKRYO14609 159 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 SEC14L5O43304 696 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 STSP08842 583 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 TMPRSS3P57727 454 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 H3F3AP84243 136 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 POU3F1Q03052 451 aaPredicted RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 MVKQ03426 396 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms