RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 AGTR1P30556 359 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 H2BFSP57053 126 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 HTRA4P83105 476 aaPredicted RBP10.44□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF141Q15928 474 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 DEFB134Q4QY38 66 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 LINC01590Q5TEZ4 76 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF227Q86WZ6 799 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 SDR16C5Q8N3Y7 309 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 OR5AK2Q8NH90 309 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 CCDC107Q8WV48 283 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 ING5Q8WYH8 240 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 GCDHQ92947 438 aaPredicted RBP10.44□□□□□ -0.74
CAPN9-202ENST00000354537 GINS4Q9BRT9 223 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 TTTY10Q9BZA0 68 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 EXOSC3Q9NQT5 275 aaKnown RBP10.44□□□□□ -0.74
CAPN9-202ENST00000354537 UPB1Q9UBR1 384 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 STEAP1Q9UHE8 339 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 PLEKHM1Q9Y4G2 1056 aa10.44□□□□□ -0.74
CAPN9-202ENST00000354537 A0A087WUJ7 227 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 A0A0D9SG52 128 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 LRRC72A6NJI9 287 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 UPK3AO75631 287 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 AKAIN1P0CW23 69 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 MGMTP16455 207 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 ITPKBP27987 946 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 MAZP56270 477 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 RPS4XP62701 263 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 RPS21P63220 83 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 LTBQ06643 244 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 CST6Q15828 149 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 TSSK4Q6SA08 328 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 FLVCR1-AS1Q8TAF5 88 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 OR1F2PQ96R84 312 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 LMAN2LQ9H0V9 348 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 INSL6Q9Y581 213 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 HRH3Q9Y5N1 445 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 H3BUI4 141 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 SULT1C2O00338 296 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 LATO43561 262 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 FGF17O60258 216 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 CDC123O75794 336 aaPredicted RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 ADRA2CP18825 462 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 RPL4P36578 427 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 FGL1Q08830 312 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 EIF2B5Q13144 721 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 SGCGQ13326 291 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 FGL2Q14314 439 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 PDGFRLQ15198 375 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 PCGF3Q3KNV8 242 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 CFAP77Q6ZQR2 320 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 PXT1Q8NFP0 134 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 OR4E2Q8NGC2 313 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 OR4C16Q8NGL9 310 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 OR5M1Q8NGP8 315 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 ZNRF4Q8WWF5 429 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 LIPHQ8WWY8 451 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 MRPS24Q96EL2 167 aaKnown RBP10.43□□□□□ -0.74
CAPN9-202ENST00000354537 PTCHD1Q96NR3 888 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 NMNAT3Q96T66 252 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 ALG12Q9BV10 488 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 APMAPQ9HDC9 416 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 PILRAQ9UKJ1 303 aa10.43□□□□□ -0.74
CAPN9-202ENST00000354537 FXYD6-FXYD2A0A087WZ82 144 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 CYR61O00622 381 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 DNAJB6O75190 326 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF254O75437 659 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PMS2P2O95744 297 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PAK4O96013 591 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 HOXC4P09017 264 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ICAM2P13598 275 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF35P13682 527 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 SDHBP21912 280 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 EMDP50402 254 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 CLDN12P56749 244 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 OR7E24Q6IFN5 339 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PM20D2Q8IYS1 436 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 MUC20Q8N307 709 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 EXD3Q8N9H8 876 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 OR51L1Q8NGJ5 315 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZDHHC1Q8WTX9 485 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 FBXW5Q969U6 566 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 SLC38A3Q99624 504 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 FXYD6Q9H0Q3 95 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF107Q9UII5 783 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PCOLCE2Q9UKZ9 415 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 GGT3PA6NGU5 568 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 NPIPB9F8W1W9 429 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 GOSR2O14653 212 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 P2RX6O15547 441 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PRAMEF2O60811 474 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 MTRF1O75570 445 aaKnown RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ABHD16AO95870 558 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 TXNDC12O95881 172 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ANXA2P07355 339 aaKnown RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 SLC35E2P0CK97 266 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms