RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RPS10-NUDT3A0A1W2PQS6 291 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 LINC00862A6NCI5 91 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 OR7A10O76100 309 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 OR51A4Q8NGJ6 313 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 FOXN4Q96NZ1 517 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 ELF4Q99607 663 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 C1QTNF6Q9BXI9 259 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 MRM2Q9UI43 246 aaKnown RBP16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 FOXJ3Q9UPW0 622 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 EML5Q05BV3 1969 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 I3L521 148 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 KHNYNO15037 678 aaKnown RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 CTDSPLO15194 276 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 GPR143P51810 404 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 LINC00303Q3SY05 128 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF684Q5T5D7 378 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 STAC2Q6ZMT1 411 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 TAF8Q7Z7C8 310 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 PMM1Q92871 262 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 ADAD1Q96M93 576 aaKnown RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 SCP2D1Q9UJQ7 156 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF337Q9Y3M9 751 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 PDGFAP04085 211 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 MAS1P04201 325 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 P2RX1P51575 399 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 HSF2Q03933 536 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 LTBQ06643 244 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 HYAL4Q2M3T9 481 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 GPR139Q6DWJ6 353 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 MCATQ8IVS2 390 aaKnown RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 ARHGEF39Q8N4T4 335 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF321PQ8N8H1 164 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 OR52B4Q8NGK2 314 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 NOX3Q9HBY0 568 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 Q9N2J8 555 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 RXFP3Q9NSD7 469 aa16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 TMEM184BQ9Y519 407 aaPredicted RBP16.49■□□□□ 0.23
PTP4A3-202ENST00000349124 TRAV8-7A0A075B6U6 113 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 KRT33AO76009 404 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 GLCEO94923 617 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 CTHP32929 405 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 CTXN1P60606 82 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 GAS6Q14393 721 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 GRK1Q15835 563 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 TMEM69Q5SWH9 247 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 FGD2Q7Z6J4 655 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 GABARAPH6UMI1 98 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 ARPC3O15145 178 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 RAD1O60671 282 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 UPK3AO75631 287 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 WISP1O95388 367 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 IFNA16P05015 189 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 ALDOBP05062 364 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 GPR3P46089 330 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 RAG2P55895 527 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 TSPAN5P62079 268 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 FCAMRQ8WWV6 532 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 KCNK15Q9H427 330 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 WDR76Q9H967 626 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 KLHL9Q9P2J3 617 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 FKBP7Q9Y680 259 aa16.48■□□□□ 0.23
PTP4A3-202ENST00000349124 A0A1B0GVI7 797 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 TNFRSF10CO14798 259 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 LCN1P31025 176 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ADH7P40394 386 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 CAPZA2P47755 286 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 OC90Q02509 493 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 DLX2Q07687 328 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 TCTE1Q5JU00 501 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 POMZP3Q6PJE2 187 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 SEZ6L2Q6UXD5 910 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 NHLRC1Q6VVB1 395 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 C7orf50Q9BRJ6 194 aaKnown RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MFRPQ9BY79 579 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 OR10A5Q9H207 317 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 PIPOXQ9P0Z9 390 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MGAT4CQ9UBM8 478 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 GPRIN2O60269 458 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 RGS11O94810 467 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MST1P26927 711 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MAOBP27338 520 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 RPS4XP62701 263 aaKnown RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 HHEXQ03014 270 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 COMMD7Q86VX2 200 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 SLC35F3Q8IY50 421 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 LSM14AQ8ND56 463 aaKnown RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 GPBAR1Q8TDU6 330 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 S100A16Q96FQ6 103 aaKnown RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ACTR6Q9GZN1 396 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 CLEC4MQ9H2X3 399 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 TCF7L1Q9HCS4 588 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 NANSQ9NR45 359 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF69Q9UC07 566 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 OR5K3A6NET4 321 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ELOA3DA6NLF2 546 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 FBXO45P0C2W1 286 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 EGR4Q05215 589 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms