RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATG4DQ86TL0 474 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PRSS58Q8IYP2 241 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 GJD3Q8N144 294 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 OR52I2Q8NH67 350 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 RPS4Y2Q8TD47 263 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 HSPA12BQ96MM6 686 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DMRTA2Q96SC8 542 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 LPAR4Q99677 370 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 NDEL1Q9GZM8 345 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 OR5V1Q9UGF6 321 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 NCKAP1Q9Y2A7 1128 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PCDHGA5Q9Y5G8 931 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CIB4A0PJX0 185 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TRABD2BA6NFA1 517 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF593O00488 134 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 LMX1BO60663 402 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SLC19A2O60779 497 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TOXO94900 526 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ABHD16AO95870 558 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PNPP00491 289 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PLGP00747 810 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 YES1P07947 543 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 HLA-DOBP13765 273 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 EDNRAP25101 427 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DCTDP32321 178 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 RPL4P36578 427 aaKnown RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 STX4Q12846 297 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 GGTLC2Q14390 218 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DEFB133Q30KQ1 61 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 OR5M10Q6IEU7 315 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ULK3Q6PHR2 472 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TMPRSS9Q7Z410 1059 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 GLB1L2Q8IW92 636 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 C1orf216Q8TAB5 229 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 NR4A3Q92570 626 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TGM7Q96PF1 710 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CITED4Q96RK1 184 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CCDC3Q9BQI4 270 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 C1QTNF6Q9BXI9 259 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 NKIRAS2Q9NYR9 191 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 KLHL21Q9UJP4 597 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TRIOBPQ9H2D6 2365 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ASCC3Q8N3C0 2202 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 IGHV3-20A0A0C4DH32 117 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 MEIS3P1A6NDR6 274 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 SOX1O00570 391 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 KHNYNO15037 678 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CTNSO60931 367 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ICOSLGO75144 302 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 SCO1O75880 301 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 NDUFB2O95178 105 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 FBXO45P0C2W1 286 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ASAH2BP0C7U1 165 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 GALP22466 123 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 RBMS1P29558 406 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 HOXD11P31277 338 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ATP12AP54707 1039 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 UBE2MP61081 183 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 C19orf57Q0VDD7 668 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CAMK2BQ13554 666 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CAMK2DQ13557 499 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF74Q16587 644 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 YOD1Q5VVQ6 348 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 TMEM205Q6UW68 189 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 MARCH3Q86UD3 253 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF433Q8N7K0 673 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 TOR1AIP2Q8NFQ8 470 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 OR52B4Q8NGK2 314 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 SGTBQ96EQ0 304 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ADOQ96SZ5 270 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 COQ7Q99807 217 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ALG12Q9BV10 488 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 LIN7BQ9HAP6 207 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 TAS2R5Q9NYW4 299 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 MMP17Q9ULZ9 603 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 KIF26BQ2KJY2 2108 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 C7orf66A4D0T2 115 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 B3GALNT1O75752 331 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 OR2B3O76000 313 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 OR7A10O76100 309 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ALX3O95076 343 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CD1CP29017 333 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 GDNFP39905 211 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 GUCA2AQ02747 115 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ZP2Q05996 745 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 RPL18Q07020 188 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 LIPNQ5VXI9 398 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 ZCCHC12Q6PEW1 402 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 NHLRC1Q6VVB1 395 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 LRRTM1Q86UE6 522 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 SMRP1Q8NCR6 262 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 FAM71CQ8NEG0 241 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 GPR119Q8TDV5 335 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CREB3L1Q96BA8 519 aa5.48□□□□□ -1.53
CLCN3-201ENST00000347613 CNN2Q99439 309 aaKnown RBP5.48□□□□□ -1.53
CLCN3-201ENST00000347613 SEC22CQ9BRL7 303 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms