RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 KISS1RQ969F8 398 aaPredicted RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 RNFT2Q96EX2 444 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 PIGQQ9BRB3 760 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ZNF649Q9BS31 505 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ASPNQ9BXN1 380 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 HES7Q9BYE0 225 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 OR2B2Q9GZK3 357 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 VCX3AQ9NNX9 186 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 KLHL1Q9NR64 748 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 HAO2Q9NYQ3 351 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 WARS2Q9UGM6 360 aaKnown RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 DIMT1Q9UNQ2 313 aaKnown RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 B3GALT5Q9Y2C3 310 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 RPH3AQ9Y2J0 694 aaPredicted RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 ALPK2Q86TB3 2170 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 OR6C68A6NDL8 312 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NPIPB13A6NJU9 1138 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NPIPB4C9JG80 1138 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 C11orf98E9PRG8 122 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 RNF13O43567 381 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NME2P1O60361 137 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 PMS2P2O95744 297 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 IGHMP01871 453 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 OPN1LWP04000 364 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 LCKP06239 509 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NME2P22392 152 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 TCEA1P23193 301 aaKnown RBP9.86□□□□□ -0.83
ECM1-201ENST00000346569 H3F3AP84243 136 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 HYAL4Q2M3T9 481 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 ARMC4Q5T2S8 1044 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 GPR141Q7Z602 305 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 YRDCQ86U90 279 aaKnown RBP9.86□□□□□ -0.83
ECM1-201ENST00000346569 NANOGP1Q8N7R0 232 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 ARIH2OSQ8N7S6 290 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 ZNF248Q8NDW4 579 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 FAM83FQ8NEG4 500 aaPredicted RBP9.86□□□□□ -0.83
ECM1-201ENST00000346569 SDR9C7Q8NEX9 313 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 PROKR2Q8NFJ6 384 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 FDCSPQ8NFU4 85 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 RORBQ92753 470 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 MIB2Q96AX9 1013 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 RASD2Q96D21 266 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 SCMH1Q96GD3 660 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 C5orf34Q96MH7 638 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 TSPAN32Q96QS1 320 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NMNAT3Q96T66 252 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 JAM3Q9BX67 310 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NDEL1Q9GZM8 345 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 TXNIPQ9H3M7 391 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 CHST11Q9NPF2 352 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 ALKBH4Q9NXW9 302 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 CLEC2DQ9UHP7 191 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 DKKL1Q9UK85 242 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 BOKQ9UMX3 212 aaPredicted RBP9.86□□□□□ -0.83
ECM1-201ENST00000346569 KCNMB2Q9Y691 235 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 COMMD3-BMI1R4GMX3 469 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 NBEAQ8NFP9 2946 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 IGF2RP11717 2491 aa9.86□□□□□ -0.83
ECM1-201ENST00000346569 DSPP15924 2871 aaKnown RBP9.86□□□□□ -0.83
ECM1-201ENST00000346569 SMG1Q96Q15 3661 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 A0A0J9YW62 118 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 TEX13CA0A0J9YWL9 993 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 LOC102725191A0A1B0GVB3 256 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 IRGMA1A4Y4 181 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 SLC22A31A6NKX4 558 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 M0R3G1 203 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 GLSO94925 669 aaPredicted RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 AKR7A3O95154 331 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 FADS2O95864 444 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 PTHP01270 115 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 HPNP05981 417 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 CLUP10909 449 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 HLA-DOBP13765 273 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 PAICSP22234 425 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 SLC25A1P53007 311 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 GFRA1P56159 465 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 RPL27P61353 136 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 PUDPQ08623 228 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 DBPQ10586 325 aaPredicted RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 ACKR1Q16570 336 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 DEFB109BQ30KR1 87 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 MESTQ5EB52 335 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 B3GLCTQ6Y288 498 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 CCDC81Q6ZN84 652 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 PXKQ7Z7A4 578 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 KDM8Q8N371 416 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 TMEM99Q8N816 258 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 FAM98AQ8NCA5 519 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 OR4F15Q8NGB8 312 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
ECM1-201ENST00000346569 ZNF519Q8TB69 540 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 ZPLD1Q8TCW7 415 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 ZNRF4Q8WWF5 429 aa9.85□□□□□ -0.83
ECM1-201ENST00000346569 KCNE4Q8WWG9 221 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms