RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SREBF1P36956 1147 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 IRF8Q02556 426 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PLPPR5Q32ZL2 321 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF528Q3MIS6 628 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 B3GALNT2Q8NCR0 500 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 NINJ1Q92982 152 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HBEGFQ99075 208 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 STARD10Q9Y365 291 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GAGE10A6NGK3 116 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 M0R082 166 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GPM6BQ13491 265 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF770Q6IQ21 691 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DPPA3Q6W0C5 159 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 Q6ZPB1 254 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF417Q8TAU3 575 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MSI2Q96DH6 328 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 A0A1W2PPV4 95 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM150BA6NC51 233 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 IGSF6O95976 241 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HPP00738 406 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC25A4P12235 298 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RCAN2Q14206 197 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 EXT1Q16394 746 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF789Q5FWF6 425 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2B11Q5JQS5 317 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DCAF10Q5QP82 559 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 BRICD5Q6PL45 260 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 NLGN1Q8N2Q7 840 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PPTC7Q8NI37 304 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 WNT8BQ93098 351 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MS4A12Q9NXJ0 267 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC6A14Q9UN76 642 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MOB4Q9Y3A3 225 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TP53I11O14683 189 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 FCER1AP12319 257 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SMPD1P17405 629 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TAF1CQ15572 869 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF776Q68DI1 518 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SFXN5Q8TD22 340 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GCDHQ92947 438 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TIMP4Q99727 224 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DPH7Q9BTV6 452 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC39A9Q9NUM3 307 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MARCH11A6NNE9 402 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC16A5O15375 505 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ERAL1O75616 437 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 STAG3L1P0CL83 205 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 EPORP19235 508 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 AGAP20933 346 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 KHKP50053 298 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 COL9A2Q14055 689 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 BCL7AQ4VC05 210 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ADAM5Q6NVV9 412 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GLB1L2Q8IW92 636 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 JAGN1Q8N5M9 183 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HDHD5Q9BXW7 423 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PIN4Q9Y237 131 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PCNX2A6NKB5 2137 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TBX19O60806 448 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RD3LP0DJH9 198 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TKFCQ3LXA3 575 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 FAM174BQ3ZCQ3 159 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SIRPB2Q5JXA9 342 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 KIAA0907Q7Z7F0 614 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PKMYT1Q99640 499 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DNAJB11Q9UBS4 358 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 EVX1P49640 407 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SELENOWP63302 87 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SLAMF1Q13291 335 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 EXOSC2Q13868 293 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR8G1Q15617 311 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR153Q6NV75 609 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ESPNLQ6ZVH7 1005 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 C20orf196Q8IYI0 205 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR4M1Q8NGD0 313 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SLC2A12Q8TD20 617 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PXYLP1Q8TE99 480 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MRPL13Q9BYD1 178 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LRTM1Q9HBL6 345 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ERVK13-1Q9NX77 482 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PSG11Q9UQ72 335 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SEMA4FO95754 770 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ICAM2P13598 275 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PCMT1P22061 227 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR5D16Q8NGK9 328 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR2G3Q8NGZ4 309 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MS4A10Q96PG2 267 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TAS2R5Q9NYW4 299 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CLEC2DQ9UHP7 191 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 B3GALT5Q9Y2C3 310 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR45Q9Y5Y3 372 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 A0A087WUJ7 227 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OOEPA6NGQ2 149 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ACTL6AO96019 429 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HIST1H1CP16403 213 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 Q5PR19 223 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF648Q5T619 568 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CNTN4Q8IWV2 1026 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZFPM1Q8IX07 1006 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms