RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 POM121CA8CG34 1229 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 NPIPB7O75200 414 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 CLPTM1O96005 669 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 G6PDP11413 515 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 CASQ1P31415 396 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 IL13RA1P78552 427 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 CCL8P80075 99 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 PCLAFQ15004 111 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 OCLNQ16625 522 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 CCDC153Q494R4 210 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 MRPL2Q5T653 305 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 C1orf140Q5VVS0 124 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 SAXO2Q658L1 398 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 REP15Q6BDI9 236 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 LEG1Q6P5S2 330 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 GSPT2Q8IYD1 628 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 CCDC63Q8NA47 563 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 OR4A15Q8NGL6 344 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 PKP2Q99959 881 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF385DQ9H6B1 395 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 WIPI2Q9Y4P8 454 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 RYR3Q15413 4870 aa13.94□□□□□ -0.18
NECTIN1-202ENST00000340882 A8MVM7 634 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF99A8MXY4 864 aaPredicted RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 HMGN4O00479 90 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 RIPK2O43353 540 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 AGR2O95994 175 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 PNMTP11086 282 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 CD79AP11912 226 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 RPS4Y1P22090 263 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 OMGP23515 440 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 AQP5P55064 265 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 LCN2P80188 198 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 HNRNPA0Q13151 305 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 GSG1Q2KHT4 349 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 KLF17Q5JT82 389 aaPredicted RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 WDFY1Q8IWB7 410 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 CMIPQ8IY22 773 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 GPR137CQ8N3F9 429 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 CADM2Q8N3J6 435 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 FNDC5Q8NAU1 212 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 GTF3AQ92664 365 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 RAB39BQ96DA2 213 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 PTDSS2Q9BVG9 487 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 PSMC3IPQ9P2W1 217 aaPredicted RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 NOX1Q9Y5S8 564 aa13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 SOX21Q9Y651 276 aaPredicted RBP13.93□□□□□ -0.18
NECTIN1-202ENST00000340882 A0A1W2PPW3 197 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 RNASET2O00584 256 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 SLC43A1O75387 559 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 CPSF4O95639 269 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 RNASE1P07998 156 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 TFPTP0C1Z6 253 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 PRG2P13727 222 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 ARRB2P32121 409 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 CRHR1P34998 444 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 BAMBIQ13145 260 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 CHI3L2Q15782 390 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 GSTA3Q16772 222 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 TRMT5Q32P41 509 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 GKAP1Q5VSY0 366 aaPredicted RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 TMEM123Q8N131 208 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 NOA1Q8NC60 698 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 SLC25A36Q96CQ1 311 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 OR2M2Q96R28 347 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 TAAR3PQ9P1P4 343 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 TANC2Q9HCD6 1990 aa13.92□□□□□ -0.18
NECTIN1-202ENST00000340882 C17orf100A8MU93 164 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 M0R3G1 203 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF43P17038 809 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 UQCRC2P22695 453 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 CRYBB2P43320 205 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 PTDSS1P48651 473 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 CLDN8P56748 225 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 CCDC36Q8IYA8 594 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 DEFB108BQ8NET1 73 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 FGFBP3Q8TAT2 258 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 NEURL3Q96EH8 262 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 MMP26Q9NRE1 261 aa13.91□□□□□ -0.18
NECTIN1-202ENST00000340882 TRIM13O60858 407 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 PATE4P0C8F1 98 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 IL7RP16871 459 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 GATA3P23771 443 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 GCH1P30793 250 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 RBMXP38159 391 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 RAD52P43351 418 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 RPS5P46782 204 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 GIPRP48546 466 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 ERVS71-1P61550 626 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms