RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FURINP09958 794 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 CCL5P13501 91 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 RPE65Q16518 533 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 NKG7Q16617 165 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 SYT14P1Q58G82 188 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 SAXO2Q658L1 398 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 CTRCQ99895 268 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 UBQLN3Q9H347 655 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 B3GAT2Q9NPZ5 323 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.06□□□□□ -1.12
RTN3-202ENST00000339997 GPR34Q9UPC5 381 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 ADAM18Q9Y3Q7 739 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 PLEKHM1Q9Y4G2 1056 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 MDC1Q14676 2089 aaKnown RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 DRGXA6NNA5 263 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 FCMRO60667 390 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 RAB3AP20336 220 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 FOXK2Q01167 660 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 ZP2Q05996 745 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 PDZK1IP1Q13113 114 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 MRPL49Q13405 166 aaKnown RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 RBMS2Q15434 407 aaKnown RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 CST9LP1Q5W188 147 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 CHST8Q9H2A9 424 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 MEPEQ9NQ76 525 aaPredicted RBP8.06□□□□□ -1.12
RTN3-202ENST00000339997 SLC6A13Q9NSD5 602 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 HIF1ANQ9NWT6 349 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 LHX3Q9UBR4 397 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 ZNF281Q9Y2X9 895 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 EMC9Q9Y3B6 208 aa8.06□□□□□ -1.12
RTN3-202ENST00000339997 PCM1Q15154 2024 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR5H15A6NDH6 313 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 NAP1L6A6NFF2 107 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR5H14A6NHG9 310 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR5H1A6NKK0 313 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 IMPA2O14732 288 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 DPM1O60762 260 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ATG12O94817 140 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ZNF44P15621 663 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PPP3CBP16298 524 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PRPS1P60891 318 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 TANGO2Q6ICL3 276 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 FAM57BQ71RH2 274 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 LACC1Q8IV20 430 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 UEVLDQ8IX04 471 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 TMEM99Q8N816 258 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR52H1Q8NGJ2 320 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR52B4Q8NGK2 314 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR4K15Q8NH41 348 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 CLSTN3Q9BQT9 956 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 FKRPQ9H9S5 495 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 HHATLQ9HCP6 504 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OR2W5A6NFC9 320 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 SLC43A1O75387 559 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 SULT1C4O75897 302 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 CD79AP11912 226 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 TAS2R19P59542 299 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 CTBSQ01459 385 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 RUNX3Q13761 415 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 MEP1BQ16820 701 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PYCR3Q53H96 274 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 SLCO4C1Q6ZQN7 724 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 SH2D5Q6ZV89 423 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PXT1Q8NFP0 134 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PIGCQ92535 297 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 MALSU1Q96EH3 234 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ARL5BQ96KC2 179 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PRRT1Q99946 306 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 BANF2Q9H503 90 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ACER3Q9NUN7 267 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 B3GNT2Q9NY97 397 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 Q9Y3F1 56 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 LTBP1Q14766 1721 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 A0A0A6YYJ9 748 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 TSTD3H0UI37 97 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 P2RY10O00398 339 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 GPX2P18283 190 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 OTX2P32243 289 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 CD80P33681 288 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 RAD52P43351 418 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 DEFB103AP81534 67 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 CDK3Q00526 305 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 DLX2Q07687 328 aaPredicted RBP8.05□□□□□ -1.12
RTN3-202ENST00000339997 PHLDA2Q53GA4 152 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 SLC6A19Q695T7 634 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 STEAP1BQ6NZ63 245 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 Q6ZTK2 550 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
RTN3-202ENST00000339997 SECTM1Q8WVN6 248 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 PNPLA2Q96AD5 504 aa8.05□□□□□ -1.12
RTN3-202ENST00000339997 A0A087WUU8 490 aa8.04□□□□□ -1.12
RTN3-202ENST00000339997 K7ESM1 405 aa8.04□□□□□ -1.12
RTN3-202ENST00000339997 AIPO00170 330 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms