RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 DRD2P14416 443 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 DTYMKP23919 212 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 MFSD12Q6NUT3 480 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 KLHDC8BQ8IXV7 354 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 HAVCR2Q8TDQ0 301 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TINAGL1Q9GZM7 467 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 ZNF727A8MUV8 499 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ZNF623O75123 536 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 GABRA5P31644 462 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 SF3B4Q15427 424 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■□□□□ 10.9
USP47-202ENST00000339865 OR7E24Q6IFN5 339 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 MDGA2Q7Z553 956 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 CELF5Q8N6W0 485 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 SLC35G3Q8N808 338 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ADAMTS14Q8WXS8 1223 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ST8SIA4Q92187 359 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 H1FXQ92522 213 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 NDFIP1Q9BT67 221 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ELOVL3Q9HB03 270 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 FRS3O43559 492 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 PRAMEF4O60810 478 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 FABP1P07148 127 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 FCGR2AP12318 317 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 HTR3AP46098 478 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 SULT1A2P50226 295 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 RAB13P51153 203 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 LCN6P62502 163 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ZNF684Q5T5D7 378 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 OR2T2Q6IF00 324 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 MRPL10Q7Z7H8 261 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 WDR5BQ86VZ2 330 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 OR10G3Q8NGC4 313 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 SFXN2Q96NB2 322 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 HOXD1Q9GZZ0 328 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TIMM8AO60220 97 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 BLVRBP30043 206 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 CCKARP32238 428 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ATP1B3P54709 279 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 RAC1P63000 192 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 Q6ZVL8 140 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 LARP4Q71RC2 724 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■■□ 26.4
USP47-202ENST00000339865 GGHQ92820 318 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TSACCQ96A04 125 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 CTDSP2O14595 271 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 IL1RNP18510 177 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SPCS2Q15005 226 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 ZNF542PQ5EBM4 170 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 C9orf135Q5VTT2 229 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 STEAP1BQ6NZ63 245 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 TMEM123Q8N131 208 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 CELF2-AS1Q8N7Q2 184 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 ZNF320A2RRD8 509 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SNRPBP14678 240 aaKnown RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 HCCSP53701 268 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 OR8B8Q15620 311 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 MS4A13Q5J8X5 152 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 ZNF691Q5VV52 312 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 UBAC2Q8NBM4 344 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 DVL3Q92997 716 aaPredicted RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 DDAH2O95865 285 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 CD80P33681 288 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 RAB40BQ12829 278 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 OR5D18Q8NGL1 313 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SLCO2A1Q92959 643 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 STACQ99469 402 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 C1GALT1Q9NS00 363 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SEMA4GQ9NTN9 838 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SLIT1O75093 1534 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 TYROBPO43914 113 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 GDNFP39905 211 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SLC25A11Q02978 314 aaKnown RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 ZFP62Q8NB50 900 aaPredicted RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 IL17FQ96PD4 163 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 LYSMD1Q96S90 227 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 OR7C2O60412 319 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 DUSP28Q4G0W2 176 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 DYRK2Q92630 601 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 CEP250Q9BV73 2442 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 USP2O75604 605 aaPredicted RBP11.97□□□□□ -0.49
USP47-202ENST00000339865 LALBAP00709 142 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 ETV6P41212 452 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 DOC2AQ14183 400 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 OR52E8Q6IFG1 317 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 C22orf39Q6P5X5 142 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 ADGRG5Q8IZF4 528 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 CORO2AQ92828 525 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 TPSD1Q9BZJ3 242 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 OR51I2Q9H344 312 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 GPR160Q9UJ42 338 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms