RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ZNF578Q96N58 590 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 SLC46A1Q96NT5 459 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 IP6K3Q96PC2 410 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CDCP1Q9H5V8 836 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 NIPAL2Q9H841 368 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 KLHL9Q9P2J3 617 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 OBSL1O75147 1896 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 EIF1AYO14602 144 aaKnown RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 FZD7O75084 574 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CSF3P09919 207 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PRR35P0CG20 571 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 LIPCP11150 499 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PRPH2P23942 346 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ETV5P41161 510 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ETV1P50549 477 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 DBPQ10586 325 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 SGCBQ16585 318 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CREB3L2Q70SY1 520 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 LRRC56Q8IYG6 542 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 AMER3Q8N944 861 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 OR6T1Q8NGN1 323 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF350Q9GZX5 532 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 SCP2D1Q9UJQ7 156 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 DKKL1Q9UK85 242 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 TRAV18A0A075B6X5 111 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PRSS23O95084 383 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CYB5AP00167 134 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PVALBP20472 110 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PCMT1P22061 227 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 EXT1Q16394 746 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 FAM76BQ5HYJ3 339 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CFAP77Q6ZQR2 320 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CPEB2Q7Z5Q1 589 aaKnown RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 TMEM17Q86X19 198 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-201ENST00000334136 PRRC1Q96M27 445 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 LMF1Q96S06 567 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 ORAI3Q9BRQ5 295 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 MFFQ9GZY8 342 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 B4GALT7Q9UBV7 327 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 KLHL21Q9UJP4 597 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 RALGAPA1Q6GYQ0 2036 aa10.84□□□□□ -0.67
HDAC6-201ENST00000334136 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 C11orf98E9PRG8 122 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 GOSR2O14653 212 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 GZMKP49863 264 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 CCL11P51671 97 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ACTC1P68032 377 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ACTA1P68133 377 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 TRMT12Q53H54 448 aaKnown RBP10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ZCCHC12Q6PEW1 402 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 OVCH1Q7RTY7 1134 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 C15orf40Q8WUR7 153 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 TMEM234Q8WY98 164 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 CNOT9Q92600 299 aaKnown RBP10.83□□□□□ -0.68
HDAC6-201ENST00000334136 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 PLEKHA1Q9HB21 404 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 CBLCQ9ULV8 474 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 EDARQ9UNE0 448 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SOCS6O14544 535 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 LRRTM2O43300 516 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SLC22A5O76082 557 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 MMP11P24347 488 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ART1P52961 327 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 CHRNEQ04844 493 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 AIMP2Q13155 320 aaKnown RBP10.83□□□□□ -0.68
HDAC6-201ENST00000334136 BEX5Q5H9J7 111 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 KANSL1Q7Z3B3 1105 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SDR9C7Q8NEX9 313 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 OR52D1Q9H346 318 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ASB4Q9Y574 426 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 GXYLT2A0PJZ3 443 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SLC43A1O75387 559 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 FARS2O95363 451 aaKnown RBP10.83□□□□□ -0.68
HDAC6-201ENST00000334136 TCRBP04435 133 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 UCHL1P09936 223 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 P2RY14Q15391 338 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 TRAM1Q15629 374 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 DCST2Q5T1A1 773 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ACSM5Q6NUN0 579 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 LINC00696Q6ZRV3 163 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 RPS19BP1Q86WX3 136 aaKnown RBP10.83□□□□□ -0.68
HDAC6-201ENST00000334136 OR4M1Q8NGD0 313 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 HAVCR1Q96D42 359 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SGTBQ96EQ0 304 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 MAP6Q96JE9 813 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 SLC6A7Q99884 636 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 BTBD2Q9BX70 525 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF160Q9HCG1 818 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 HHATLQ9HCP6 504 aa10.83□□□□□ -0.68
HDAC6-201ENST00000334136 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms