RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
RAB11FIP1-202ENST00000330843 TRAPPC2LQ9UL33 140 aa11.9□□□□□ -0.5
RAB11FIP1-202ENST00000330843 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 P04436 131 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 IL2RGP31785 369 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 WDR5P61964 334 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 KIAA0895LQ68EN5 471 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 MED9Q9NWA0 146 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CSAG2Q9Y5P2 127 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SPEF2Q9C093 1822 aa11.9□□□□□ -0.51
RAB11FIP1-202ENST00000330843 A0A0U1RQS6 177 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SUSD5O60279 629 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 LPLP06858 475 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 KPTNQ9Y664 436 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ASCC3Q8N3C0 2202 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 GPR39O43194 453 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 GASTP01350 101 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ACP2P11117 423 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 DRD2P14416 443 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF28P17035 718 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CD80P33681 288 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 F2RL1P55085 397 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SNRPEP62304 92 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF154Q13106 437 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 MELKQ14680 651 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF805Q5CZA5 627 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 HSFX1Q9UBD0 423 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 NUP205Q92621 2012 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 A0A1W2PP55 124 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF90Q03938 601 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CAMK2DQ13557 499 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 NHLRC2Q8NBF2 726 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 L3HYPDHQ96EM0 354 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 USP22Q9UPT9 525 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SDK1Q7Z5N4 2213 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 PSMB1P20618 241 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CCKARP32238 428 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 LCN6P62502 163 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 UBE2IP63279 158 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 PMS2P11Q13670 270 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 BCDIN3DQ7Z5W3 292 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF300Q96RE9 604 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OTOFQ9HC10 1997 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 H7BYZ3 331 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ADAMTS4O75173 837 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 S100A7P31151 101 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ARSDP51689 593 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 MLF2Q15773 248 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 TBCEQ15813 527 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 HACD4Q5VWC8 232 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 Q6ZN92 141 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 C19orf47Q8N9M1 422 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OR5A2Q8NGI9 324 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 GABARAPH6UMI1 98 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SLC16A7O60669 478 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 GABARAPO95166 117 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 F13BP05160 661 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SPP1P10451 314 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 SCGB1A1P11684 91 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 PMCHP20382 165 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 NPY4RP50391 375 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 GLCCI1Q86VQ1 547 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 DDOQ99489 341 aa11.89□□□□□ -0.51
RAB11FIP1-202ENST00000330843 TRBV4-1A0A0J9YWV2 114 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 FBLL1A6NHQ2 334 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 FABP9Q0Z7S8 132 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 TAS1R3Q7RTX0 852 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OR13C5Q8NGS8 318 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OR4F5Q8NH21 305 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 STT3BQ8TCJ2 826 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OR4F4Q96R69 305 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OBP2BQ9NPH6 170 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 A0A1W2PNV4 684 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 OR7C1O76099 320 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 PTHP01270 115 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ZNF280AP59817 542 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 CHRNEQ04844 493 aa11.88□□□□□ -0.51
RAB11FIP1-202ENST00000330843 ISCA2Q86U28 154 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms