RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ARHGAP19Q14CB8 494 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 EIPR1Q53HC9 387 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 MFSD12Q6NUT3 480 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 C3orf33Q6P1S2 294 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ACOT4Q8N9L9 421 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 OR5M8Q8NGP6 311 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 TFGQ92734 400 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 TINAGL1Q9GZM7 467 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 USP36Q9P275 1121 aaKnown RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 COL4A6Q14031 1691 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SNRNP200O75643 2136 aaKnown RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 IGKV1-8A0A0C4DH67 115 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SCAMP1O15126 338 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 IFNGP01579 166 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 CD3DP04234 171 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 RPN2P04844 631 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 MELTFP08582 738 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 EPCAMP16422 314 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ECH1Q13011 328 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 DUSP8Q13202 625 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 CEBPEQ15744 281 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 AMZ1Q400G9 498 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 RAB12Q6IQ22 244 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ARHGAP11AQ6P4F7 1023 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 LRRTM1Q86UE6 522 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SKA3Q8IX90 412 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SOCS4Q8WXH5 440 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 EDAQ92838 391 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 DVL3Q92997 716 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 ARSGQ96EG1 525 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SFXN1Q9H9B4 322 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SERTAD3Q9UJW9 196 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 MED31Q9Y3C7 131 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM82A0PJX8 343 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 MEIS3P1A6NDR6 274 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SULT2B1O00204 365 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 GNB5O14775 395 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ERI3O43414 337 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SSX5O60225 188 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 CXCL14O95715 111 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 S100A8P05109 93 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 THBS1P07996 1170 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF806P0C7X5 589 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ABOP16442 354 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SYN1P17600 705 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 NFYBP25208 207 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 DLSTP36957 453 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ZIC1Q15915 447 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 LIPNQ5VXI9 398 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM215Q68D42 235 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 BIVMQ86UB2 503 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM25Q86YD3 366 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TCEAL3Q969E4 200 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 MS4A6EQ96DS6 147 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 C14orf105Q9NVL8 296 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 DHCR7Q9UBM7 475 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 DTX4Q9Y2E6 619 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 DUXAA6NLW8 204 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 PSMD9O00233 223 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SPINT1O43278 529 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 HIST1H1CP16403 213 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SLC6A6P31641 620 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 CASRP41180 1078 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 EFNB2P52799 333 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 EPHB3P54753 998 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 SLC7A9P82251 487 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ARHGAP11BQ3KRB8 267 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM35AQ53FP2 167 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 MRPL2Q5T653 305 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 GAREM2Q75VX8 874 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 PARS2Q7L3T8 475 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TMPRSS12Q86WS5 348 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 NPAS4Q8IUM7 802 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 LINC01555Q8NAE3 123 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 CLEC1AQ8NC01 280 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 OR7G2Q8NG99 324 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 OR1J4Q8NGS1 313 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 OR5K2Q8NHB8 316 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 MRPL48Q96GC5 212 aaKnown RBP11.68□□□□□ -0.54
CCDC60-201ENST00000327554 PCBD2Q9H0N5 130 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms