RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 GPX7Q96SL4 187 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 TAPBPLQ9BX59 468 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 MFRPQ9BY79 579 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 CHRNA9Q9UGM1 479 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 RPH3AQ9Y2J0 694 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 TMED7Q9Y3B3 224 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 PCDHGB7Q9Y5F8 929 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ATMQ13315 3056 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 TMEM129A0AVI4 362 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM166BA8MTA8 275 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PRR23D1E9PI22 279 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 SCG5P05408 212 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM87AP0C7U9 286 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PRR23D2P0DMB1 279 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF3P17036 446 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 IL11P20809 199 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 NR4A1P22736 598 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 CXCR1P25024 350 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 SRD5A2P31213 254 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 HTR3AP46098 478 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PLGLB1Q02325 96 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 EGR4Q05215 589 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC35F1Q5T1Q4 408 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PLBD1Q6P4A8 553 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 C19orf48Q6RUI8 117 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 MEPCEQ7L2J0 689 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 LRRC17Q8N6Y2 441 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 ZBTB8AQ96BR9 441 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 UBL7Q96S82 380 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 JAM3Q9BX67 310 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 ZMIZ1Q9ULJ6 1067 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 HIF3AQ9Y2N7 669 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PIEZO2Q9H5I5 2752 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 TMEM72A0PK05 275 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 CCRL2O00421 344 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 ARPC3O15145 178 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 IDH3BO43837 385 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 EFNA2O43921 213 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 HSMCR30P0CW71 290 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 NOS3P29474 1203 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 DYNC1I2Q13409 638 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF169Q14929 603 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 Q6ZS92 163 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 YRDCQ86U90 279 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 TMEM251Q8N6I4 163 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM83FQ8NEG4 500 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 BBS1Q8NFJ9 593 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 RELTQ969Z4 430 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 PRORYQ9H606 182 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 NANSQ9NR45 359 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 B4GALT7Q9UBV7 327 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 KLHL21Q9UJP4 597 aa16.89■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC22A31A6NKX4 558 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 FAM183AA6NL82 134 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 LRRN3E7EW58 273 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 AIREO43918 545 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 SUSD5O60279 629 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 CELA3AP09093 270 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 PAICSP22234 425 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 APOBEC1P41238 236 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 MAGEA5P43359 124 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ETV1P50549 477 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 MLLT11Q13015 90 aaPredicted RBP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ITGADQ13349 1161 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 TIMM50Q3ZCQ8 353 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 RNFT1Q5M7Z0 435 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 RAET1LQ5VY80 246 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 PTP4A1Q93096 173 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 OPALINQ96PE5 141 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ERMAPQ96PL5 475 aaPredicted RBP16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 OR2B2Q9GZK3 357 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ISYNA1Q9NPH2 558 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 NRIP3Q9NQ35 241 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 MED12Q93074 2177 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 FREM3P0C091 2139 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 PKD1L2Q7Z442 2459 aa16.88■□□□□ 0.29
EXOSC3-201ENST00000327304 ZC3H12DA2A288 527 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 TRAPPC6AO75865 159 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 IGHA1P01876 353 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 GADD45AP24522 165 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 EIF1P41567 113 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 B3GALT5-AS1P59052 145 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 PPIAP62937 165 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 TSTQ16762 297 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 HYAL4Q2M3T9 481 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 ASB18Q6ZVZ8 466 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC37A3Q8NCC5 494 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 OR14L1PQ8NHC6 308 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 OR11A1Q9GZK7 315 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 FKRPQ9H9S5 495 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 ZNF229Q9UJW7 825 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 SLC6A5Q9Y345 797 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 MPDZO75970 2070 aa16.87■□□□□ 0.29
EXOSC3-201ENST00000327304 OR2M5A3KFT3 312 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 MCIDASD6RGH6 385 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 J3QRE1 110 aa16.86■□□□□ 0.29
EXOSC3-201ENST00000327304 TSPAN19P0C672 248 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms