RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PCGF3Q3KNV8 242 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 Q499Y3 187 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 SLC6A19Q695T7 634 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 LRFN4Q6PJG9 635 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 OR4C16Q8NGL9 310 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 OR6K3Q8NGY3 331 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 ZPLD1Q8TCW7 415 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
SSH1-201ENST00000326470 SEMA4CQ9C0C4 833 aa15.3■□□□□ 0.04
SSH1-201ENST00000326470 DNAJB12Q9NXW2 375 aaKnown RBP15.3■□□□□ 0.04
SSH1-201ENST00000326470 P2RX6O15547 441 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 XRCC3O43542 346 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 RPL4P36578 427 aaKnown RBP15.29■□□□□ 0.04
SSH1-201ENST00000326470 MPPED2Q15777 294 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 PRICKLE4Q2TBC4 344 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 MUC20Q8N307 709 aaPredicted RBP15.29■□□□□ 0.04
SSH1-201ENST00000326470 MRPS24Q96EL2 167 aaKnown RBP15.29■□□□□ 0.04
SSH1-201ENST00000326470 FKRPQ9H9S5 495 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 MRPS23Q9Y3D9 190 aaKnown RBP15.29■□□□□ 0.04
SSH1-201ENST00000326470 COLEC10Q9Y6Z7 277 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 A0A087WV48 116 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 ARPC3O15145 178 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 FGF17O60258 216 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 RLN1P04808 185 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 RPA2P15927 270 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 ETFDHQ16134 617 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 DCAF12L2Q5VW00 463 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 LRRN1Q6UXK5 716 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 LRRTM1Q86UE6 522 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 OR6N1Q8NGY5 312 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 SMARCD2Q92925 531 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 OR2A5Q96R48 311 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 MKKSQ9NPJ1 570 aaPredicted RBP15.29■□□□□ 0.04
SSH1-201ENST00000326470 TAS2R8Q9NYW2 309 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 HEBP2Q9Y5Z4 205 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 DOCK9Q9BZ29 2069 aa15.29■□□□□ 0.04
SSH1-201ENST00000326470 GLCEO94923 617 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 PRKACAP17612 351 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 MPGP29372 298 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 LTBQ06643 244 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 MGAT2Q10469 447 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 LINC01590Q5TEZ4 76 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 ULK3Q6PHR2 472 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 TSSK4Q6SA08 328 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 A0A1B0GVT2 93 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 URADA6NGE7 173 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 ZNF860A6NHJ4 632 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 GNB5O14775 395 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 SCAMP1O15126 338 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 NKX2-2O95096 273 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 EGFP01133 1207 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 FCER2P06734 321 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 CSF1P09603 554 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 CT62P0C5K7 136 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 EPCAMP16422 314 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 GRPRP30550 384 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 UBE2MP61081 183 aaKnown RBP15.28■□□□□ 0.04
SSH1-201ENST00000326470 MELKQ14680 651 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 ISXQ2M1V0 245 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 ATRAIDQ6UW56 229 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 TMPRSS12Q86WS5 348 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 ASB13Q8WXK3 278 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 TRIM43Q96BQ3 446 aaPredicted RBP15.28■□□□□ 0.04
SSH1-201ENST00000326470 SLC38A3Q99624 504 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 MFFQ9GZY8 342 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
SSH1-201ENST00000326470 SLC25A32Q9H2D1 315 aa15.28■□□□□ 0.04
SSH1-201ENST00000326470 TRBV5-5A0A0J9YX44 114 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 GPR75O95800 540 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 APOC3P02656 99 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 HNRNPA1P09651 372 aaKnown RBP eCLIP15.27■□□□□ 0.04
SSH1-201ENST00000326470 TACSTD2P09758 323 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 ZNF10P21506 573 aaPredicted RBP15.27■□□□□ 0.04
SSH1-201ENST00000326470 ADH7P40394 386 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 SCAND1P57086 179 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 PLA2G7Q13093 441 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 ALKBH1Q13686 389 aaKnown RBP15.27■□□□□ 0.04
SSH1-201ENST00000326470 KIRREL2Q6UWL6 708 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 OR5AK2Q8NH90 309 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 TNFAIP8L1Q8WVP5 186 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 RASD2Q96D21 266 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 GPR174Q9BXC1 333 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 SLC6A15Q9H2J7 730 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 LYRM4Q9HD34 91 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 RXFP3Q9NSD7 469 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 SERGEFQ9UGK8 458 aa15.27■□□□□ 0.04
SSH1-201ENST00000326470 TMEM272A0A1B0GTI8 110 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 CTSVO60911 334 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 UPK3AO75631 287 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 RPP14O95059 124 aaKnown RBP15.27■□□□□ 0.03
SSH1-201ENST00000326470 SPDEFO95238 335 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 IGF2P01344 180 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 RLN2P04090 185 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 CSRP1P21291 193 aaKnown RBP15.27■□□□□ 0.03
SSH1-201ENST00000326470 SOX2P48431 317 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 FAM220AQ7Z4H9 259 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 KRT77Q7Z794 578 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms