RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PUDPQ08623 228 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 KRT80Q6KB66 452 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 LNX2Q8N448 690 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 MARVELD2Q8N4S9 558 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 OR5M9Q8NGP3 310 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 EMC6Q9BV81 110 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 HCAR1Q9BXC0 346 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SLC25A19Q9HC21 320 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SURF4O15260 269 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 WBP4O75554 376 aaKnown RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 NUDT6P53370 316 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 MAD2L1BPQ15013 274 aaPredicted RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 CASP12Q6UXS9 341 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 FAM122BQ7Z309 247 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 TEX19Q8NA77 164 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 SDR9C7Q8NEX9 313 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 SGCDQ92629 289 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 OTULINQ96BN8 352 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 FN3KQ9H479 309 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 Q9H521 79 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 IMPAD1Q9NX62 359 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF346Q9UL40 294 aaKnown RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 CAMK2AQ9UQM7 478 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 GJE1A6NN92 205 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 CLUP10909 449 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 GABRB1P18505 474 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 PCYT1AP49585 367 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 CDC42P60953 191 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 SLC35A1P78382 337 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 ACKR1Q16570 336 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 TMEM225Q6GV28 225 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 RPUSD3Q6P087 351 aaKnown RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 PAQR6Q6TCH4 344 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 PTCHD4Q6ZW05 846 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 BBS1Q8NFJ9 593 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 OR52E2Q8NGJ4 325 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 OR6S1Q8NH40 331 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 SNRNP40Q96DI7 357 aaKnown RBP13.65□□□□□ -0.22
PRPF3-201ENST00000324862 NMNAT3Q96T66 252 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 DNAJC27Q9NZQ0 273 aa13.65□□□□□ -0.22
PRPF3-201ENST00000324862 AQP7P3A6NL99 342 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 XPNPEP2O43895 674 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 CD14P08571 375 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 IFNGR1P15260 489 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 RAC3P60763 192 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 EFNB1P98172 346 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 CDK5R2Q13319 367 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 PON3Q15166 354 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 UGT2A3Q6UWM9 527 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 DPY19L2P2Q6ZN68 376 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 SCAIQ8N9R8 606 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 FNDC9Q8TBE3 224 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 APOL4Q9BPW4 351 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 SLC25A18Q9H1K4 315 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 INIPQ9NRY2 104 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 B3GALT5Q9Y2C3 310 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 AQP8O94778 261 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 GYPBP06028 91 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
PRPF3-201ENST00000324862 CDKN2AP42771 156 aaKnown RBP13.64□□□□□ -0.23
PRPF3-201ENST00000324862 CSNK2A1P68400 391 aaPredicted RBP13.64□□□□□ -0.23
PRPF3-201ENST00000324862 CRMP1Q14194 572 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 MESTQ5EB52 335 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 RPL13AP3Q6NVV1 102 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 ZNF786Q8N393 782 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 RHOXF1Q8NHV9 184 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 TSSK2Q96PF2 358 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 GPX7Q96SL4 187 aaPredicted RBP13.64□□□□□ -0.23
PRPF3-201ENST00000324862 HINT3Q9NQE9 182 aaKnown RBP13.64□□□□□ -0.23
PRPF3-201ENST00000324862 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 TUBD1Q9UJT1 453 aa13.64□□□□□ -0.23
PRPF3-201ENST00000324862 ACTL6AO96019 429 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 NTF4P34130 210 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 MFSD13AQ14CX5 517 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 ZNF239Q16600 458 aaKnown RBP13.63□□□□□ -0.23
PRPF3-201ENST00000324862 FAM180AQ6UWF9 173 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 OR9Q1Q8NGQ5 310 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 LRR1Q96L50 414 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 TUBA1CQ9BQE3 449 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 CACNA1BQ00975 2339 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 LINC01387J3KSC0 135 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 FZD7O75084 574 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 ENTPD6O75354 484 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 PLBD1Q6P4A8 553 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 NHLRC1Q6VVB1 395 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
PRPF3-201ENST00000324862 CPOQ8IVL8 374 aa13.63□□□□□ -0.23
PRPF3-201ENST00000324862 MEIOBQ8N635 442 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms