RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PPP3R1P63098 170 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 CDONQ4KMG0 1287 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 SPATC1Q76KD6 591 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 OVCH1Q7RTY7 1134 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 MS4A15Q8N5U1 240 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GALNT6Q8NCL4 622 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 CEP76Q8TAP6 659 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ATOH1Q92858 354 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 TSPAN32Q96QS1 320 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PDCD1LG2Q9BQ51 273 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FKRPQ9H9S5 495 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 RXFP3Q9NSD7 469 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 NCDNQ9UBB6 729 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ST6GALNAC2Q9UJ37 374 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ZNF318Q5VUA4 2279 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TRAV36DV7A0A075B6V5 113 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TMED7-TICAM2A0A0A6YYA0 188 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TRBV2A0A0J9YWF9 115 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TRBV11-1A0A0K0K1C0 115 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SNPHO15079 494 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 ARHGEF9O43307 516 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TDGF1P13385 188 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MYL9P24844 172 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CAPZA2P47755 286 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 GDI2P50395 445 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 SCN1BQ07699 218 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 IL10RAQ13651 578 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 P2RY14Q15391 338 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TRAM1Q15629 374 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 COL28A1Q2UY09 1125 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MESTQ5EB52 335 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SYT9Q86SS6 491 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 ADGRG3Q86Y34 549 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MAML2Q8IZL2 1156 aaPredicted RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 OR6V1Q8N148 313 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 UBE2J2Q8N2K1 259 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CELF2-AS1Q8N7Q2 184 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 NFAM1Q8NET5 270 aaPredicted RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 GPR119Q8TDV5 335 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 HPS1Q92902 700 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SMIM19Q96E16 107 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CRB3Q9BUF7 120 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SEMA4CQ9C0C4 833 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 OR11A1Q9GZK7 315 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SYT4Q9H2B2 425 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 GALNT9Q9HCQ5 603 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TAS2R10Q9NYW0 307 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TAS2R5Q9NYW4 299 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TMED7Q9Y3B3 224 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TMEM72A0PK05 275 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 FAM25AB3EWG3 89 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 FAM25CB3EWG5 89 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 FAM25GB3EWG6 89 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MEN1O00255 615 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SC5DO75845 299 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CSF3P09919 207 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CFL1P23528 166 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 EDNRAP25101 427 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 RPS27P42677 84 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 EVX1P49640 407 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 POLR2HP52434 150 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 IL18Q14116 193 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 CDK5R1Q15078 307 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TRIM61Q5EBN2 209 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 FAM69AQ5T7M9 428 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MZT2AQ6P582 158 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 FAM199XQ6PEV8 388 aaPredicted RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 IL20RBQ6UXL0 311 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 GRINAQ7Z429 371 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 C1orf210Q8IVY1 113 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 GDPD1Q8N9F7 314 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 GFM1Q96RP9 751 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 SPSB2Q99619 263 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 PRMT8Q9NR22 394 aaPredicted RBP6.86□□□□□ -1.31
IFT88-201ENST00000319980 SACM1LQ9NTJ5 587 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 SLC6A5Q9Y345 797 aa6.86□□□□□ -1.31
IFT88-201ENST00000319980 TVP23AA6NH52 213 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 OGG1O15527 345 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 BGLAPP02818 100 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 CD97P48960 835 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 SLC26A5P58743 744 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 LPAL2Q16609 132 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 ZNF385CQ66K41 422 aaPredicted RBP6.85□□□□□ -1.31
IFT88-201ENST00000319980 BICRALQ6AI39 1079 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 HBMQ6B0K9 141 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 NUP54Q7Z3B4 507 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 PXKQ7Z7A4 578 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 Q8N402 240 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 NEDD4LQ96PU5 975 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 NPAS1Q99742 590 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 WDR77Q9BQA1 342 aaPredicted RBP6.85□□□□□ -1.31
IFT88-201ENST00000319980 PTDSS2Q9BVG9 487 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 RASD1Q9Y272 281 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 MPDZO75970 2070 aa6.85□□□□□ -1.31
IFT88-201ENST00000319980 TMEM221A6NGB7 291 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms