RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PTNP21246 168 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 SSTR2P30874 369 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 GALNSP34059 522 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 OMPP47874 163 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 OPCMLQ14982 345 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 TRAM2Q15035 370 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 B3GNTL1Q67FW5 361 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 SLC41A3Q96GZ6 507 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 ARL5BQ96KC2 179 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 OR1F2PQ96R84 312 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 UBL7Q96S82 380 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 PLA2G12AQ9BZM1 189 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 POLE3Q9NRF9 147 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 GPN3Q9UHW5 284 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 ING1Q9UK53 422 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-201ENST00000317677 NUBP2Q9Y5Y2 271 aa11.94□□□□□ -0.5
CPNE1-201ENST00000317677 TRAV6A0A075B6T7 132 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 C17orf105B2RV13 164 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 GPR171O14626 319 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 PDCD5O14737 125 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF806P0C7X5 589 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 FGF9P31371 208 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-201ENST00000317677 CD96P40200 585 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
CPNE1-201ENST00000317677 MXD1Q05195 221 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 ST3GAL3Q11203 375 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 SERTAD2Q14140 314 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 P2RY14Q15391 338 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 EIPR1Q53HC9 387 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 BCL2L15Q5TBC7 163 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 QSOX2Q6ZRP7 698 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 GPR135Q8IZ08 494 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 POGLUT1Q8NBL1 392 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 SLC38A9Q8NBW4 561 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 TMEM255BQ8WV15 326 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 NSMAFQ92636 917 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 NDC1Q9BTX1 674 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 POLR2J2Q9GZM3 115 aaKnown RBP11.93□□□□□ -0.5
CPNE1-201ENST00000317677 ANKRD19PQ9H560 264 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 MMACHCQ9Y4U1 282 aa11.93□□□□□ -0.5
CPNE1-201ENST00000317677 IGHV5-10-1A0A0J9YXX1 117 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 A0A1B0GX78 115 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 KLF4O43474 513 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SLC19A2O60779 497 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FABP1P07148 127 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 GUSBP08236 651 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 HBQ1P09105 142 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ANKRD34CP0C6C1 535 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 CXCL3P19876 107 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 RORAP35398 523 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 MPLP40238 635 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 C1DQ13901 141 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 MICBQ29980 383 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 Q3ZCU0 254 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 MZT2AQ6P582 158 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FGD2Q7Z6J4 655 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 OR52N1Q8NH53 320 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 NR4A3Q92570 626 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FGF11Q92914 225 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SENP5Q96HI0 755 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SFXN2Q96NB2 322 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 C1QTNF6Q9BXI9 259 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 DNTTIP1Q9H147 329 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SMOC1Q9H4F8 434 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 EGLN3Q9H6Z9 239 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 PNO1Q9NRX1 252 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 BABAM2Q9NXR7 383 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 CNIH4Q9P003 139 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SERTAD3Q9UJW9 196 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SLC7A7Q9UM01 511 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ASCC3Q8N3C0 2202 aaKnown RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 TRAV20A0A0B4J274 112 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 TCRBV16S1A1N1A0A5B0 115 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 TOX3O15405 576 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 DDAH2O95865 285 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 IGKV3-11P04433 115 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 DRD5P21918 477 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 LCN1P31025 176 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 SLC37A1P57057 533 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 IL18Q14116 193 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ZNHIT3Q15649 155 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 DECR1Q16698 335 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 MINDY4Q4G0A6 757 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ACSM5Q6NUN0 579 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 ATRAIDQ6UW56 229 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 FAM198BQ6UWH4 519 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 C17orf107Q6ZR85 190 aa11.92□□□□□ -0.5
CPNE1-201ENST00000317677 PRSS58Q8IYP2 241 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms