RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 NHLRC1Q6VVB1 395 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 NAXDQ8IW45 347 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 SCARB1Q8WTV0 552 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 RASD2Q96D21 266 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 C1QTNF6Q9BXI9 259 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 TCF7L1Q9HCS4 588 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 CXXC1Q9P0U4 656 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 SESN1Q9Y6P5 492 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 A8MXK9 166 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 GNB5O14775 395 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 UPK3AO75631 287 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 HOXC4P09017 264 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 SLC35E2P0CK97 266 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 POU3F2P20265 443 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 CSRP1P21291 193 aaKnown RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 NUP62P37198 522 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 SCAND1P57086 179 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 KIAA1024LP59773 190 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 RERGQ96A58 199 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 CXorf58Q96LI9 332 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 ALG12Q9BV10 488 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 RXFP3Q9NSD7 469 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 WSB2Q9NYS7 404 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 OPN4Q9UHM6 478 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 NUP210LQ5VU65 1888 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 A0A087WV48 116 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 PYCARD-AS1I3L0S3 204 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 PSMD9O00233 223 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 SLC25A1P53007 311 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 ERVK-25P63136 954 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 SFRP5Q5T4F7 317 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 LRRN1Q6UXK5 716 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 SLC16A9Q7RTY1 509 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 GLB1L2Q8IW92 636 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 OR4N2Q8NGD1 307 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 A6NCN8 305 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 EFCAB7A8K855 629 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 KRBOX1C9JBD0 128 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 H7C417 338 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 FOXS1O43638 330 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 RP2O75695 350 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 ABHD16AO95870 558 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 EGFP01133 1207 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 TACSTD2P09758 323 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 PPP3CBP16298 524 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 ALKBH1Q13686 389 aaKnown RBP17.43■□□□□ 0.38
RTN4-201ENST00000317610 RBMS2Q15434 407 aaKnown RBP17.43■□□□□ 0.38
RTN4-201ENST00000317610 TUSC1Q2TAM9 212 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 MANEAQ5SRI9 462 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 TANGO2Q6ICL3 276 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 TMUB2Q71RG4 321 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 EXD3Q8N9H8 876 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 OR6M1Q8NGM8 313 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 FAM3CQ92520 227 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 OR1F2PQ96R84 312 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 DPYSL5Q9BPU6 564 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 MTFP1Q9UDX5 166 aa17.43■□□□□ 0.38
RTN4-201ENST00000317610 A0A1B0GVT2 93 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 SLC31A1O15431 190 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 APODP05090 189 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 GABRA1P14867 456 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 GRPRP30550 384 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 FAUP35544 74 aaKnown RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 ADPRHP54922 357 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 PRPS1P60891 318 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 TCEA2Q15560 299 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 OR52B4Q8NGK2 314 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 OR5AK2Q8NH90 309 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 CCL4L1Q8NHW4 92 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 CAPN10Q9HC96 672 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 MRM2Q9UI43 246 aaKnown RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 TP53BP1Q12888 1972 aaPredicted RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 TRBV23OR9-2A0A075B6M9 112 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 UBE2QL1A1L167 161 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 XRCC3O43542 346 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 TMIGD3P0DMS9 266 aaPredicted RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 ATF4P18848 351 aaPredicted RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 ZNHIT3Q15649 155 aaPredicted RBP17.42■□□□□ 0.38
RTN4-201ENST00000317610 GXYLT1Q4G148 440 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 RNF44Q7L0R7 432 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 ZNF595Q8IYB9 648 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 SLC19A3Q9BZV2 496 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 FKRPQ9H9S5 495 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 FRRS1LQ9P0K9 344 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 KLHDC2Q9Y2U9 406 aa17.42■□□□□ 0.38
RTN4-201ENST00000317610 POM121BA6NF01 834 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 FGF2P09038 288 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 OR8G3PP0DMU2 310 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 ITPKBP27987 946 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 CDKN2AP42771 156 aaKnown RBP17.41■□□□□ 0.38
RTN4-201ENST00000317610 H2BFSP57053 126 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 RAB38P57729 211 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 LEG1Q6P5S2 330 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 FAM220AQ7Z4H9 259 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
RTN4-201ENST00000317610 BAHD1Q8TBE0 780 aaPredicted RBP17.41■□□□□ 0.38
RTN4-201ENST00000317610 CCDC74AQ96AQ1 378 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms