RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 RP2O75695 350 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 ARL6IP5O75915 188 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SERPINA3P01011 423 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SMIM10L1P0DMW3 83 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 GDI2P50395 445 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CRMP1Q14194 572 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 HES5Q5TA89 166 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF836Q6ZNA1 936 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 FRRS1Q6ZNA5 592 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 OR6V1Q8N148 313 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 OR13C2Q8NGS9 318 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 MAFAQ8NHW3 353 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 ELP4Q96EB1 424 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SMIM10Q96HG1 83 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 FBXL2Q9UKC9 423 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CABIN1Q9Y6J0 2220 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 ANXA2P2A6NMY6 339 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CREBL2O60519 120 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 GALR3O60755 368 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 IFNGR1P15260 489 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 LRFN4Q6PJG9 635 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 GKN2Q86XP6 184 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CSNK1A1LQ8N752 337 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CAMKVQ8NCB2 501 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SLC16A11Q8NCK7 471 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SCARB1Q8WTV0 552 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 SPACA7Q96KW9 195 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CCDC3Q9BQI4 270 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 GLS2Q9UI32 602 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 CFAP54Q96N23 3096 aa15.72■□□□□ 0.11
SCAMP4-201ENST00000316097 OR2W5A6NFC9 320 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 B3GALNT1O75752 331 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ECDO95905 644 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 PTHLHP12272 177 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 S100A11P31949 105 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 FNTBP49356 437 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 LINC00303Q3SY05 128 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 BVESQ8NE79 360 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 OR10Z1Q8NGY1 313 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 C10orf90Q96M02 699 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF681Q96N22 645 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 NECAB3Q96P71 396 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 TGM7Q96PF1 710 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ZCCHC4Q9H5U6 513 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 CCDC86Q9H6F5 360 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 AKAP7Q9P0M2 348 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 KLHL9Q9P2J3 617 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 DAPP1Q9UN19 280 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 COPS3Q9UNS2 423 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 OR6C65A6NJZ3 312 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 BCAT2O15382 392 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 KRT33AO76009 404 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 FGF2P09038 288 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 CPN1P15169 458 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 MPIP34949 423 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 AP3S2P59780 193 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 GPR68Q15743 365 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ELFN2Q5R3F8 820 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 TMEM239Q8WW34 195 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 CDS1Q92903 461 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ACTRT3Q9BYD9 372 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ARL6Q9H0F7 186 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 PLEKHA1Q9HB21 404 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 MCCC2Q9HCC0 563 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 NTMQ9P121 344 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF223Q9UK11 482 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 PCDHGA5Q9Y5G8 931 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 WDFY3Q8IZQ1 3526 aa15.71■□□□□ 0.11
SCAMP4-201ENST00000316097 TRAV27A0A087WT01 109 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 OR2M5A3KFT3 312 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 NAP1L6A6NFF2 107 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 RIIAD1A6NNX1 92 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 GABARAPH6UMI1 98 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF136P52737 540 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 SEC61A1P61619 476 aaKnown RBP15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 OC90Q02509 493 aaPredicted RBP15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 OR52B4Q8NGK2 314 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 OR9A4Q8NGU2 314 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 OR51A7Q8NH64 312 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 ARSGQ96EG1 525 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 DMRTA2Q96SC8 542 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 CACYBPQ9HB71 228 aaKnown RBP15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 WDR45Q9Y484 360 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 ZNF780BQ9Y6R6 833 aa15.71■□□□□ 0.1
SCAMP4-201ENST00000316097 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 NDUFA2O43678 99 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 B3GALT2O43825 422 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ITGA10O75578 1167 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 UCHL1P09936 223 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 FAM199XQ6PEV8 388 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 FAM111BQ6SJ93 734 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 ATRAIDQ6UW56 229 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 TMUB2Q71RG4 321 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 RNF44Q7L0R7 432 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 METTL27Q8N6F8 245 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 THEM6Q8WUY1 208 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 SMIM19Q96E16 107 aa15.7■□□□□ 0.1
SCAMP4-201ENST00000316097 GIMAP5Q96F15 307 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms