RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 GPLD1P80108 840 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 PCGF3Q3KNV8 242 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CDNFQ49AH0 187 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TMEM71Q6P5X7 295 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TMEM17Q86X19 198 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ANKRD10Q9NXR5 420 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FBXL3Q9UKT7 428 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CENPVL1A0A0U1RR11 272 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FZD7O75084 574 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 RAB3DO95716 219 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ERGP11308 486 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FAM205BPQ63HN1 556 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CBLN3Q6UW01 205 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GPR137CQ8N3F9 429 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CCDC107Q8WV48 283 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 PDCD1LG2Q9BQ51 273 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DPCDQ9BVM2 203 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MCCC2Q9HCC0 563 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 KCND3Q9UK17 655 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 IGHV1OR21-1A0A087WYE8 117 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 PRAMEF25A6NGN4 478 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 F5H5K5 113 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GDF1P27539 372 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MAGEB1P43366 347 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CSNK1A1P48729 337 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 INSL4Q14641 139 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 COL28A1Q2UY09 1125 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 C9orf135Q5VTT2 229 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ARIH2OSQ8N7S6 290 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 SMRP1Q8NCR6 262 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ARHGAP9Q9BRR9 750 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CDCP1Q9H5V8 836 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 A6NL46 340 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ARPC1BO15143 372 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 THSD4Q6ZMP0 1018 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 OR2I1PQ8NGU4 316 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GPR119Q8TDV5 335 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 NEDD4LQ96PU5 975 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MBD2Q9UBB5 411 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MGAT4AQ9UM21 535 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TRIM64CA6NLI5 447 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TSPAN9O75954 239 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 AKR7A3O95154 331 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ELK1P19419 428 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 NXPH1P58417 271 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 PSG6Q00889 435 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 KIAA1143Q96AT1 154 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MVB12AQ96EY5 273 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF486Q96H40 463 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DOK1Q99704 481 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 HCAR1Q9BXC0 346 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 LDAHQ9H6V9 325 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GSTT2P0CG29 244 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 BCKDHBP21953 392 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ERP29P30040 261 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 EEF1A1P68104 462 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF704Q6ZNC4 412 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 NDUFAF7Q7L592 441 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ABHD12BQ7Z5M8 362 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 CCDC120Q96HB5 630 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 P2RY10O00398 339 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 AMY2AP04746 511 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 BAK1Q16611 211 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 SLC25A46Q96AG3 418 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 C3orf49Q96BT1 292 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GIMAP5Q96F15 307 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF717Q9BY31 904 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 SIGLEC7Q9Y286 467 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 EMP3P54852 163 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FGFBP1Q14512 234 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GAB4Q2WGN9 574 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 LRRC28Q86X40 367 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 MGAT4CQ9UBM8 478 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TEX13DA0A0J9YY54 714 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 M0R233 179 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 LCATP04180 440 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ANXA3P12429 323 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF28P17035 718 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 ARPC4P59998 168 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 LTBQ06643 244 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 AGAP7PQ5VUJ5 663 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 LAIR1Q6GTX8 287 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DNAAF1Q8NEP3 725 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 POTEKPQ9BYX7 375 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 TSPAN10Q9H1Z9 355 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 PPIL3Q9H2H8 161 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 H0YIG0 161 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DSCR3O14972 297 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GIFP27352 417 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 SNU13P55769 128 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 RAB11BQ15907 218 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 SLC35D3Q5M8T2 416 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 GUSBP11Q6P575 273 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FTMTQ8N4E7 242 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FSCN3Q9NQT6 498 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 RBFOX1Q9NWB1 397 aaKnown RBP5.66□□□□□ -1.5
PRKDC-201ENST00000314191 FLRT3Q9NZU0 649 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DTX4Q9Y2E6 619 aa5.66□□□□□ -1.5
PRKDC-201ENST00000314191 DISC1C4P0D8 188 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms