RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 UQCRC1P31930 480 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 OR3A2P47893 321 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 DAP3P51398 398 aaKnown RBP15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 SIRPAP78324 504 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 SRSF1Q07955 248 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 ABHD12BQ7Z5M8 362 aaPredicted RBP15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 ZNF100Q8IYN0 542 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 GNPDA2Q8TDQ7 276 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 DNAJC9Q8WXX5 260 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 STMN2Q93045 179 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 OSBPL10Q9BXB5 764 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 SLC24A3Q9HC58 644 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 MGAT4BQ9UQ53 548 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 LRRK2Q5S007 2527 aa15.9■□□□□ 0.14
SSSCA1-201ENST00000309328 A8MXE2 369 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 CENPBD1B2RD01 187 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 LRRN3E7EW58 273 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 MS4A18H0YCH9 400 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 RAMP1O60894 148 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 NR2C1P13056 603 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 KLK2P20151 261 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 MAKP20794 623 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 POU3F1Q03052 451 aaPredicted RBP15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 COX10Q12887 443 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 TSPAN31Q12999 210 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 MS4A18Q3C1V0 323 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 ZBED5Q49AG3 693 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 ALG10Q5BKT4 473 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 FAM205BPQ63HN1 556 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 TFAP2EQ6VUC0 442 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 AAED1Q7RTV5 226 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 BTLAQ7Z6A9 289 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 ZER1Q7Z7L7 766 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 KIF18BQ86Y91 864 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 LRRC17Q8N6Y2 441 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 POMGNT2Q8NAT1 580 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 RELL2Q8NC24 303 aaPredicted RBP15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 GIPC3Q8TF64 312 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 FAM46AQ96IP4 442 aaKnown RBP15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 USB1Q9BQ65 265 aaKnown RBP15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 INIPQ9NRY2 104 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 TAS2R5Q9NYW4 299 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 U3KQV3 271 aa15.89■□□□□ 0.13
SSSCA1-201ENST00000309328 DIDO1Q9BTC0 2240 aaKnown RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 USP9XQ93008 2570 aaPredicted RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 NCOA6Q14686 2063 aaPredicted RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 UNC119BA6NIH7 251 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 KLF4O43474 513 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 TRAF3IP2O43734 574 aaPredicted RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 TIPRLO75663 272 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ADAP00813 363 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ANXA8P13928 327 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 FUT4P22083 530 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 GPR4P46093 362 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ERFP50548 548 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 RPL18Q07020 188 aaKnown RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 P2RY6Q15077 328 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF770Q6IQ21 691 aaPredicted RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 PGBD2Q6P3X8 592 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 SHQ1Q6PI26 577 aaKnown RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 CASP12Q6UXS9 341 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 HIPK1Q86Z02 1210 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 EPHX4Q8IUS5 362 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 LIX1LQ8IVB5 337 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 SVOPLQ8N434 492 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 OR10G2Q8NGC3 310 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 RNASE6Q93091 150 aaKnown RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 CENPNQ96H22 339 aaPredicted RBP15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF556Q9HAH1 456 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 SEC14L4Q9UDX3 406 aa15.88■□□□□ 0.13
SSSCA1-201ENST00000309328 ARHGAP21Q5T5U3 1957 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 ERICH4A6NGS2 130 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF726A6NNF4 738 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 FAM90A27PA6NNH2 459 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 SLC43A1O75387 559 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 NDUFB2O95178 105 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 GSSP48637 474 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 SORDQ00796 357 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 FBXW9Q5XUX1 488 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 CD300LDQ6UXZ3 194 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 Q6ZT83 130 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 SSX8Q7RTT4 187 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 ZIC4Q8N9L1 334 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 AQP11Q8NBQ7 271 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 OR6X1Q8NH79 312 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 PYDC1Q8WXC3 89 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 LRR1Q96L50 414 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 DOCK7Q96N67 2140 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 GPX7Q96SL4 187 aaPredicted RBP15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 RBM24Q9BX46 236 aaKnown RBP15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 HDHD5Q9BXW7 423 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 LINC00470Q9BZP3 86 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 SLCO5A1Q9H2Y9 848 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 C12orf49Q9H741 205 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 MALT1Q9UDY8 824 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 SIGLEC7Q9Y286 467 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 GCN1Q92616 2671 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms