RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TMEM185BQ9H7F4 350 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 ISG20L2Q9H9L3 353 aaKnown RBP13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
SHCBP1-201ENST00000303383 CLDN25C9JDP6 229 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 GLCEO94923 617 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 HPP00738 406 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 GABRA5P31644 462 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 OPRL1P41146 370 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 BMXP51813 675 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 MXD1Q05195 221 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 SNTA1Q13424 505 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 IL22RA1Q8N6P7 574 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 C4orf36Q96KX1 117 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 PTDSS2Q9BVG9 487 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 MMP27Q9H306 513 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 EXPH5Q8NEV8 1989 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 WISP1O95388 367 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 HLA-DPB1P04440 258 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 OR2T7P0C7T2 308 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 CRYBB2P43320 205 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 TLE3Q04726 772 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF846Q147U1 533 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 OR2T27Q8NH04 317 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 G3V3Y1 287 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 MAP2K6P52564 334 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 MLF1P58340 268 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 OC90Q02509 493 aaPredicted RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ARL9Q6T311 187 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 PLCZ1Q86YW0 608 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ARL5BQ96KC2 179 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 WDR12Q9GZL7 423 aaKnown RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 CPNE5Q9HCH3 593 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 ANKRD10Q9NXR5 420 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 TAS2R5Q9NYW4 299 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
SHCBP1-201ENST00000303383 NPIPB7O75200 414 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 OPN1LWP04000 364 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 P04436 131 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 PTGDSP41222 190 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 HCCSP53701 268 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 TAS2R43P59537 309 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ACTA2P62736 377 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ACTG2P63267 376 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 IL10RAQ13651 578 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 PLPPR5Q32ZL2 321 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 GLYR1Q49A26 553 aaPredicted RBP13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 C3orf33Q6P1S2 294 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 OR5M1Q8NGP8 315 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 THAP4Q8WY91 577 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 NPAS1Q99742 590 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 SLIRPQ9GZT3 109 aaKnown RBP13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 SYT4Q9H2B2 425 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 RPH3AQ9Y2J0 694 aaPredicted RBP13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 OTOGLQ3ZCN5 2332 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 J3QRE1 110 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF208O43345 1280 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 SELENOFO60613 162 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 RAD1O60671 282 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 CDRT1O95170 752 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 LALBAP00709 142 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 CAPZA2P47755 286 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 PUDPQ08623 228 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ACKR1Q16570 336 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 STPG1Q5TH74 334 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 ARIH2OSQ8N7S6 290 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 OR1J4Q8NGS1 313 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 MFSD8Q8NHS3 518 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 DACH2Q96NX9 599 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 HDHD5Q9BXW7 423 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 DKKL1Q9UK85 242 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
SHCBP1-201ENST00000303383 C21orf140B9A014 251 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF670-ZNF695F2Z2N8 137 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms