RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 C6P13671 934 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 RORAP35398 523 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 BTN3A2P78410 334 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 SNTB1Q13884 538 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 EIPR1Q53HC9 387 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 LY6G6FQ5SQ64 297 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 LY6G5CQ5SRR4 150 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 H3F3CQ6NXT2 135 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 OR6N1Q8NGY5 312 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 PAQR8Q8TEZ7 354 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 PTDSS2Q9BVG9 487 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF346Q9UL40 294 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ABT1Q9ULW3 272 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 PQLC2LA1A4F0 135 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 CALCBP10092 127 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 AGTR1P30556 359 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 SLC6A6P31641 620 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 EFNB2P52799 333 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ILF3Q12906 894 aaKnown RBP eCLIP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 TEAD2Q15562 447 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 LIN54Q6MZP7 749 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 OR2L13Q8N349 312 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF514Q96K75 400 aaPredicted RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 PTCHD1Q96NR3 888 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 TREM1Q9NP99 234 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 COMMD9Q9P000 198 aa11.93□□□□□ -0.5
TVP23A-201ENST00000299866 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
TVP23A-201ENST00000299866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 OR6C76A6NM76 312 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SULT1C2O00338 296 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 NARSO43776 548 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 GPRIN2O60269 458 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 FADS1O60427 444 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 AKAIN1P0CW23 69 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 DLSTP36957 453 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 NPBWR1P48145 328 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 MPPED2Q15777 294 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 FNDC3BQ53EP0 1204 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 AKIRIN2Q53H80 203 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 GLT8D1Q68CQ7 371 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ARHGAP11AQ6P4F7 1023 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ZCCHC12Q6PEW1 402 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 OR51D1Q8NGF3 324 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 GLYATL2Q8WU03 294 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 MRGPRX3Q96LB0 322 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF681Q96N22 645 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PCBD2Q9H0N5 130 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 TLNRD1Q9H1K6 362 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF629Q9UEG4 869 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 LYPD3O95274 346 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 CSN2P05814 226 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 FABP1P07148 127 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 CSF1P09603 554 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 OR4E1P0C645 316 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 OR8G3PP0DMU2 310 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SELPP16109 830 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 NFYBP25208 207 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PAN3Q58A45 887 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 TMIEQ8NEW7 156 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 CPNE2Q96FN4 548 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 Q96M85 177 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 TSPAN11A1L157 253 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 OR2AT4A6NND4 320 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PRR32B1ATL7 298 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 M0QYG6 137 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 TO15178 435 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PRICKLE3O43900 615 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SOD2P04179 222 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ARFIP1P53367 373 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SNRPEP62304 92 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PRDX1Q06830 199 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PDZK1IP1Q13113 114 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 ARHGAP19Q14CB8 494 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SMAD2Q15796 467 aaKnown RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM35AQ53FP2 167 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 AVPI1Q5T686 147 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 RXFP4Q8TDU9 374 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 IRF7Q92985 503 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 LINC00615Q96LM1 132 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 GPN3Q9UHW5 284 aaPredicted RBP11.92□□□□□ -0.5
TVP23A-201ENST00000299866 MKL2Q9ULH7 1088 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 PLEKHA6Q9Y2H5 1048 aa11.92□□□□□ -0.5
TVP23A-201ENST00000299866 SCN2AQ99250 2005 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 SPINT1O43278 529 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 HOXA2O43364 376 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 BCL2L11O43521 198 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 DUSP8Q13202 625 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 RAB33AQ14088 237 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF234Q14588 700 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 TRMT12Q53H54 448 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms