RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 LIPNQ5VXI9 398 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 FAM205BPQ63HN1 556 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 KCTD20Q7Z5Y7 419 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 PTPMT1Q8WUK0 201 aaPredicted RBP12.41□□□□□ -0.42
CDH8-201ENST00000299345 ZNRF4Q8WWF5 429 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 S100A16Q96FQ6 103 aaKnown RBP12.41□□□□□ -0.42
CDH8-201ENST00000299345 ELF4Q99607 663 aaPredicted RBP12.41□□□□□ -0.42
CDH8-201ENST00000299345 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
CDH8-201ENST00000299345 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 V9GY05 133 aa12.41□□□□□ -0.42
CDH8-201ENST00000299345 SMLR1H3BR10 107 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 CSNK1EP49674 416 aaKnown RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 SLC37A1P57057 533 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 OR1D5P58170 312 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 RPL18Q07020 188 aaKnown RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 TIGD3Q6B0B8 471 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ATG4DQ86TL0 474 aaPredicted RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 KTI12Q96EK9 354 aaPredicted RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 LPAR4Q99677 370 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 NIPAL2Q9H841 368 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 COPZ2Q9P299 210 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 MKL2Q9ULH7 1088 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 PLGP00747 810 aaPredicted RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 TCRBP04435 133 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 SRFP11831 508 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 PGCP20142 388 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 MAGEB1P43366 347 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 HSD11B2P80365 405 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 TDGQ13569 410 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ISXQ2M1V0 245 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 FCRLAQ7L513 359 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 PLXDC1Q8IUK5 500 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ARHGEF39Q8N4T4 335 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 OR8K3Q8NH51 312 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ZNF304Q9HCX3 659 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 TMEM14AQ9Y6G1 99 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 CABIN1Q9Y6J0 2220 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 LMO7DNF2Z398 122 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ICOSLGO75144 302 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 SC5DO75845 299 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 ZFPL1O95159 310 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 C1QBP02746 253 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 MT-ND4P03905 459 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 H2AFB2P0C5Z0 115 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 AP3S2P59780 193 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 SKP2Q13309 424 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 FCN2Q15485 313 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 VWA2Q5GFL6 755 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 UBE2NLQ5JXB2 153 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 SLC22A10Q63ZE4 541 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 DPY19L4Q7Z388 723 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 DEDD2Q8WXF8 326 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 TSPAN10Q9H1Z9 355 aaPredicted RBP12.4□□□□□ -0.42
CDH8-201ENST00000299345 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
CDH8-201ENST00000299345 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 CENPBD1B2RD01 187 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 DUX1O43812 170 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 EFR3AQ14156 821 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 ELAVL1Q15717 326 aaKnown RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 MARCH3Q86UD3 253 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 PLCZ1Q86YW0 608 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 RPS27P42677 84 aaKnown RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 CCR6P51684 374 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 DCAF7P61962 342 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 SFRP4Q6FHJ7 346 aaPredicted RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 MAMDC2Q7Z304 686 aaPredicted RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 TMPRSS12Q86WS5 348 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 OR1F2PQ96R84 312 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 ORAI3Q9BRQ5 295 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 TRABD2BA6NFA1 517 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 FRG2CA6NGY1 282 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 C4orf47A7E2U8 309 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 APEHP13798 732 aaKnown RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 GALNSP34059 522 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 GDNFP39905 211 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 MMP15P51511 669 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 AGFG1P52594 562 aaKnown RBP12.39□□□□□ -0.43
CDH8-201ENST00000299345 ANGPT1Q15389 498 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 TMEM69Q5SWH9 247 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 APOOLQ6UXV4 268 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 GON7Q9BXV9 100 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 GPR27Q9NS67 375 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 CLDN16Q9Y5I7 305 aa12.39□□□□□ -0.43
CDH8-201ENST00000299345 IFITM5A6NNB3 132 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms