RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 A0A087WUJ7 227 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 WISP1O95388 367 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CASP3P42574 277 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SLC37A1P57057 533 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CFHR1Q03591 330 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF117Q03924 483 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 C6orf183Q5T699 404 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SFXN4Q6P4A7 337 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 PAPD4Q6PIY7 484 aaKnown RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CORO6Q6QEF8 472 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 TIGD4Q8IY51 512 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 WDFY2Q96P53 400 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CHIAQ9BZP6 476 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 EVA1AQ9H8M9 152 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 MED17Q9NVC6 651 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 PAQR5Q9NXK6 330 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 RARRES3Q9UL19 164 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 PPIEQ9UNP9 301 aaKnown RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 A0A1W2PR77 199 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ANXA2P2A6NMY6 339 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 KHDRBS3O75525 346 aaKnown RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 OR7A10O76100 309 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 TOXO94900 526 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 TIAF1O95411 115 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CSN2P05814 226 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 EIF4EP06730 217 aaKnown RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ANXA2P07355 339 aaKnown RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CCL7P80098 99 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF85Q03923 595 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CEP78Q5JTW2 689 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 LIPNQ5VXI9 398 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 XKRXQ6PP77 449 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CD200R1LQ6Q8B3 271 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 KRT77Q7Z794 578 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 GPALPP1Q8IXQ4 340 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SLC38A9Q8NBW4 561 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 OR52N1Q8NH53 320 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 PELI1Q96FA3 418 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CDX2Q99626 313 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SDHCQ99643 169 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 FKRPQ9H9S5 495 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 NCDNQ9UBB6 729 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 V9GYH0 126 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 LYRM1O43325 122 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SIGLEC6O43699 453 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SUSD5O60279 629 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 MPZL1O95297 269 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 IGLV3-19P01714 112 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 GLB1P16278 677 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ABCD3P28288 659 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 PPICP45877 212 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CAPZA2P47755 286 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CLDN6P56747 220 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 NKAIN1Q4KMZ8 207 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 BCL2L15Q5TBC7 163 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF544Q6NX49 715 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 FCRLAQ7L513 359 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 TOMM5Q8N4H5 51 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SPEM1Q8N4L4 309 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SLC46A1Q96NT5 459 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 ATF6BQ99941 703 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 THAP7Q9BT49 309 aaPredicted RBP8.47□□□□□ -1.05
PRDM9-201ENST00000296682 RNF32Q9H0A6 362 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 SLITRK2Q9H156 845 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 MED29Q9NX70 200 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
PRDM9-201ENST00000296682 LOC100509620A0A075B734 347 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 A0A1B0GX78 115 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 CD14P08571 375 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 PGCP20142 388 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 GALP22466 123 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 GNALP38405 381 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 ADAM8P78325 824 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 SF3B4Q15427 424 aaKnown RBP eCLIP8.46□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.05
PRDM9-201ENST00000296682 PWWP2BQ6NUJ5 590 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 MDGA2Q7Z553 956 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF615Q8N8J6 731 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 NAXEQ8NCW5 288 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 MED18Q9BUE0 208 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 CCDC32Q9BV29 185 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 ZMAT3Q9HA38 289 aaKnown RBP8.46□□□□□ -1.05
PRDM9-201ENST00000296682 TAS2R10Q9NYW0 307 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 SF3B6Q9Y3B4 125 aaKnown RBP8.46□□□□□ -1.05
PRDM9-201ENST00000296682 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.05
PRDM9-201ENST00000296682 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 EFCAB7A8K855 629 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 INMT-MINDY4F8WBC2 141 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 FZD7O75084 574 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 PRKXP51817 358 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 ELAVL1Q15717 326 aaKnown RBP8.46□□□□□ -1.06
PRDM9-201ENST00000296682 TATDN3Q17R31 274 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 COL28A1Q2UY09 1125 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 AGAP6Q5VW22 663 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 FAAP20Q6NZ36 180 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 OR8S1Q8NH09 359 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF524Q96C55 264 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms