RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 DDIT4LQ96D03 193 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 RADILQ96JH8 1075 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 GALNT9Q9HCQ5 603 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 FBXO8Q9NRD0 319 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 ATXN7L1Q9ULK2 861 aaPredicted RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 GASTP01350 101 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF43P17038 809 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 LIPAP38571 399 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 MLC1Q15049 377 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 HLA-BQ31612 363 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 ENTPD8Q5MY95 495 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 FUNDC1Q8IVP5 155 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 EID2Q8N6I1 236 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 FRMD1Q8N878 549 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 RCBTB1Q8NDN9 531 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR13H1Q8NG92 308 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR5AR1Q8NGP9 310 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 RNF141Q8WVD5 230 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 TANKQ92844 425 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 NAT6Q93015 286 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 ST6GALNAC5Q9BVH7 336 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 FBXL2Q9UKC9 423 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 USP22Q9UPT9 525 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 PCDHGA6Q9Y5G7 932 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 CIB4A0PJX0 185 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 CPNE6O95741 557 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 PEX11BO96011 259 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 TEAD1P28347 426 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 CCR7P32248 378 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 PXT1Q8NFP0 134 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 ASB17Q8WXJ9 295 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 TBC1D20Q96BZ9 403 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 FAM71F1Q96KD3 344 aaPredicted RBP10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC19A3Q9BZV2 496 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 GMPR2Q9P2T1 348 aaKnown RBP10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF337Q9Y3M9 751 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 RHBDD3Q9Y3P4 386 aa10.96□□□□□ -0.66
SYNGAP1-201ENST00000293748 FTCDNL1E5RQL4 147 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 TOR1AO14656 332 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 AOAHP28039 575 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 CD79BP40259 229 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 PPT1P50897 306 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 SSTP61278 116 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 STPG1Q5TH74 334 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 PAPD4Q6PIY7 484 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 Q6ZSR9 355 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR5M11Q96RB7 305 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ERVMER34-1Q9H9K5 563 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 CA5BQ9Y2D0 317 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ENTPD2Q9Y5L3 495 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 NPFFR2Q9Y5X5 522 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 DNAH12Q6ZR08 3092 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 TRBV4-1A0A0J9YWV2 114 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 C17orf113A0A1B0GUU1 675 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 EFCAB7A8K855 629 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 E9PI62 339 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR7A17O14581 309 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 TDGF1P13385 188 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 NR0B1P51843 470 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 NXPH1P58417 271 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 SYPL1Q16563 259 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 HSD11B1LQ7Z5J1 315 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 CD163Q86VB7 1156 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 PEX11GQ96HA9 241 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 EGLN3Q9H6Z9 239 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 MYEF2Q9P2K5 600 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 A6NLC8 198 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 A8MVJ9 347 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 H0YIV9 168 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 FOXE1O00358 373 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 KCNK2O95069 426 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 MMP2P08253 660 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR2T7P0C7T2 308 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 LIPCP11150 499 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 CLDN6P56747 220 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC35A2P78381 396 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 GPLD1P80108 840 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ASAH1Q13510 395 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 DCST2Q5T1A1 773 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 C18orf63Q68DL7 685 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ADAMTSL4Q6UY14 1074 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 HORMAD2Q8N7B1 307 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR2T27Q8NH04 317 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ST7LQ8TDW4 575 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ARPC5LQ9BPX5 153 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF223Q9UK11 482 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 GPR34Q9UPC5 381 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 PPIL1Q9Y3C6 166 aa10.95□□□□□ -0.66
SYNGAP1-201ENST00000293748 K7EPK0 472 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 WDPCPO95876 746 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 GYPBP06028 91 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 ATXN1LP0C7T5 689 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-201ENST00000293748 TACR1P25103 407 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms