RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 S100A8P05109 93 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 NAT2P11245 290 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 GNRHRP30968 328 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 KIR2DL3P43628 341 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 GPAT4Q86UL3 456 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 THAP3Q8WTV1 239 aaPredicted RBP10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 MRI1Q9BV20 369 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 C20orf85Q9H1P6 137 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 PIGMQ9H3S5 423 aa10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 DIMT1Q9UNQ2 313 aaKnown RBP10.53□□□□□ -0.72
NPC1L1-201ENST00000289547 A0A0A6YYJ9 748 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 LRRC37A2A6NM11 1700 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 SGK494L7N484 410 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 SLCO2B1O94956 709 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 MMP2P08253 660 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 CD46P15529 392 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 CHATP28329 748 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 KIR2DL1P43626 348 aaPredicted RBP10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 CLDN12P56749 244 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 TRA2BP62995 288 aaKnown RBP10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 DLEU7Q6UYE1 221 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 ELP5Q8TE02 316 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 NEIL2Q969S2 332 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 CSF3RQ99062 836 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM43Q9BTV4 400 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC17A4Q9Y2C5 497 aa10.52□□□□□ -0.72
NPC1L1-201ENST00000289547 ZNF726A6NNF4 738 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 FAM171A2A8MVW0 826 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 H0YGG7 62 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 K7ESM1 405 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 RNF13O43567 381 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 KCNK5O95279 499 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 IFNA1P01562 189 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GYPBP06028 91 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 SERPINF1P36955 418 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC19A1P41440 591 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TEKQ02763 1124 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 P2RY14Q15391 338 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GPR155Q7Z3F1 870 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF679Q8IYX0 411 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 OR52H1Q8NGJ2 320 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 FRZBQ92765 325 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ACKR4Q9NPB9 350 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TBC1D29Q9UFV1 150 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 LILRA5A6NI73 299 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 C11orf98E9PRG8 122 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 POU3F3P20264 500 aaPredicted RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 SEC61A1P61619 476 aaKnown RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF550Q7Z398 422 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 RNF175Q8N4F7 328 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 CCDC54Q8NEL0 328 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 HS6ST2Q96MM7 605 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 URM1Q9BTM9 101 aaKnown RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 SRRQ9GZT4 340 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 EGLN3Q9H6Z9 239 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 OR51B4Q9Y5P0 310 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 DCDC2BA2VCK2 349 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 RGS13O14921 159 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GPR39O43194 453 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TNFSF15O95150 251 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GABRB1P18505 474 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 HCCSP53701 268 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GALK2Q01415 458 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 MAPK14Q16539 360 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 NAXDQ8IW45 347 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 RNF141Q8WVD5 230 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 DIO2Q92813 273 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 MEPEQ9NQ76 525 aaPredicted RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF629Q9UEG4 869 aaPredicted RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF175Q9Y473 711 aa10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 MN1Q10571 1320 aaPredicted RBP10.52□□□□□ -0.73
NPC1L1-201ENST00000289547 TCRBV5S2A0A599 114 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 TARM1B6A8C7 271 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 SOX1O00570 391 aaPredicted RBP10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 PPP1R2P9O14990 202 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 MT-CO3P00414 261 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 GABRA3P34903 492 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 HOXC5Q00444 222 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 TCEAL6Q6IPX3 200 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 LIX1LQ8IVB5 337 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF595Q8IYB9 648 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 RELL2Q8NC24 303 aaPredicted RBP10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 LGALS14Q8TCE9 139 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 DOK4Q8TEW6 326 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 TBC1D20Q96BZ9 403 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 LRRC61Q9BV99 259 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC6A20Q9NP91 592 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 DMRT3Q9NQL9 472 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 STARD5Q9NSY2 213 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 FAM86C1Q9NVL1 165 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
NPC1L1-201ENST00000289547 LRIT2A6NDA9 550 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms