RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CPED1A4D0V7 1026 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 H7C1C5 153 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 NDUFB2O95178 105 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 HTR3BO95264 441 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 OR2B8PP59922 312 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 LCN6P62502 163 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 CSNK2A1P68400 391 aaPredicted RBP11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 PDE7AQ13946 482 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 TMEM64Q6YI46 380 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 BPIFB2Q8N4F0 458 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 CSNK2A3Q8NEV1 391 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 IL17RDQ8NFM7 739 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 OR52H1Q8NGJ2 320 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 GHSRQ92847 366 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 CDC6Q99741 560 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 NKX6-2Q9C056 277 aaPredicted RBP11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 EMC7Q9NPA0 242 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 TRABD2BA6NFA1 517 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 OR2W5A6NFC9 320 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 MPIG6BO95866 241 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 SCGB1D1O95968 90 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 F13BP05160 661 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 SERPINF1P36955 418 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 GPR176Q14439 515 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 GPNMBQ14956 572 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 GPAT4Q86UL3 456 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 IL17RCQ8NAC3 791 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 SLC35A4Q96G79 324 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 ZNF638Q14966 1978 aaKnown RBP11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 H7C1Q1 480 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 KCNK2O95069 426 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 HNRNPA2B1P22626 353 aaKnown RBP11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 TRA2BP62995 288 aaKnown RBP11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 FABP5Q01469 135 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 ADAMTSL4Q6UY14 1074 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 OR56B2PQ8NGI1 322 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 ELP5Q8TE02 316 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 MARC2Q969Z3 335 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 C10orf90Q96M02 699 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 NARFLQ9H6Q4 476 aa11.6□□□□□ -0.55
SLC6A1-201ENST00000287766 A0A0D9SG52 128 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 DSCR3O14972 297 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 CCNOP22674 350 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 NR0B1P51843 470 aaKnown RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ACY1Q03154 408 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 CDC20Q12834 499 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OR6M1Q8NGM8 313 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OR2A1Q8NGT9 310 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 MRGPRX3Q96LB0 322 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 DCLRE1CQ96SD1 692 aaKnown RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 NKX2-4Q9H2Z4 354 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 IFT22Q9H7X7 185 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SERGEFQ9UGK8 458 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ATG12O94817 140 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 IFNA1P01562 189 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ADRB1P08588 477 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SLC2A5P22732 501 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 GZMMP51124 257 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 RIDAP52758 137 aaKnown RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 UBE2KP61086 200 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 KIAA0141Q14154 515 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 PPA1Q15181 289 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SLC9A3R2Q15599 337 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 KIAA0907Q7Z7F0 614 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 TMEM99Q8N816 258 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OR13C3Q8NGS6 347 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OR1E3Q8WZA6 343 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 TBC1D20Q96BZ9 403 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 MALSU1Q96EH3 234 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ASB16Q96NS5 453 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ST6GALNAC5Q9BVH7 336 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 PLXNA1Q9UIW2 1896 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ADAM29Q9UKF5 820 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 H3BQ06 376 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 DOK2O60496 412 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SEMA4FO95754 770 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 GPR75O95800 540 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 POU3F4P49335 361 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 GPR18Q14330 331 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SSX1Q16384 188 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OTPQ5XKR4 325 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 MFSD12Q6NUT3 480 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ESPNLQ6ZVH7 1005 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SCARB1Q8WTV0 552 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 TIMM29Q9BSF4 260 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 KATNB1Q9BVA0 655 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 CNTNAP3Q9BZ76 1288 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ABRACLQ9P1F3 81 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 PCYT1BQ9Y5K3 369 aaPredicted RBP11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 ANKRD61A6NGH8 418 aa11.59□□□□□ -0.55
SLC6A1-201ENST00000287766 HBMQ6B0K9 141 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms