RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 MMP2P08253 660 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 PLGLB1Q02325 96 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 CPEB2Q7Z5Q1 589 aaKnown RBP9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 FJX1Q86VR8 437 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 NECAP1Q8NC96 275 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 SORCS2Q96PQ0 1159 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 CSAG2Q9Y5P2 127 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 KPTNQ9Y664 436 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 LTBP3Q9NS15 1303 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 A0A1W2PPV4 95 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 POM121BA6NF01 834 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 UMAD1C9J7I0 102 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 TEKQ02763 1124 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF852Q6ZMS4 543 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 LILRA3Q8N6C8 439 aaPredicted RBP9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMEM255BQ8WV15 326 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 CHTF18Q8WVB6 975 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 RAB3CQ96E17 227 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 FBXL4Q9UKA2 621 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 PHOX2AO14813 284 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 FURINP09958 794 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 EPHA2P29317 976 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 THBS2P35442 1172 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 PGFP49763 221 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 NPY4RP50391 375 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR10A3P58181 314 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 TLE1Q04724 770 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 CST6Q15828 149 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF440Q8IYI8 595 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 TSTD1Q8NFU3 115 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 PDCD1LG2Q9BQ51 273 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC2A11Q9BYW1 496 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 ADAM19Q9H013 955 aa9.04□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMEM269A0A1B0GVZ9 245 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 A6NLC8 198 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SEC14L5O43304 696 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CSF2RAP15509 400 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HTR2CP28335 458 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF239Q16600 458 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 IAH1Q2TAA2 248 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CCSMST1Q4G0I0 132 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 GGTA1PQ4G0N0 100 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SFRP5Q5T4F7 317 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OTUD1Q5VV17 481 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC16A13Q7RTY0 426 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 TCTE3Q8IZS6 198 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 IL1F10Q8WWZ1 152 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CPNE4Q96A23 557 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 TNFRSF13CQ96RJ3 184 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SRRQ9GZT4 340 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC25A32Q9H2D1 315 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 DUSP21Q9H596 190 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 NDRG3Q9UGV2 375 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HEPACAM2A8MVW5 462 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 PAPLNO95428 1278 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 RAC2P15153 192 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CR2P20023 1033 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HTR1FP30939 366 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 EPHA4P54764 986 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CLDN2P57739 230 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CRMP1Q14194 572 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR5M10Q6IEU7 315 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 PARS2Q7L3T8 475 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR52B4Q8NGK2 314 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF160Q9HCG1 818 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 C1orf123Q9NWV4 160 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZMAT5Q9UDW3 170 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 KIF25Q9UIL4 384 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 RGS11O94810 467 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZP3P21754 424 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 FABP6P51161 128 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 EMP3P54852 163 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR7A5Q15622 319 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF74Q16587 644 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 RNF212Q495C1 297 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR52W1Q6IF63 320 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SUMF1Q8NBK3 374 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 NDUFB11Q9NX14 153 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPHK1Q9NYA1 384 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ITGB4P16144 1822 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ANKRD61A6NGH8 418 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 H0YIV9 168 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HEXBP07686 556 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 SRMP19623 302 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 HLA-FP30511 346 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 XCR1P46094 333 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 GLO1Q04760 184 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CDRT4Q8N9R6 151 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF578Q96N58 590 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 OPALINQ96PE5 141 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 ATF6BQ99941 703 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
CTDSPL2-201ENST00000260327 CRLF2Q9HC73 371 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms