RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 CHIAQ9BZP6 476 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 MGAT4AQ9UM21 535 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC35A3Q9Y2D2 325 aa13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 RP1L1Q8IWN7 2480 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-201ENST00000257604 ORC5O43913 435 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 LYPD3O95274 346 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 HEXBP07686 556 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 EFNB1P98172 346 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 FUT7Q11130 342 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 TOR2AQ5JU69 321 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 PWWP2BQ6NUJ5 590 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 QSOX2Q6ZRP7 698 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 LNX2Q8N448 690 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF527Q8NB42 609 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 OR5M1Q8NGP8 315 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 OR5W2Q8NH69 310 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 CMC2Q9NRP2 79 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 NUDT15Q9NV35 164 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 IKZF2Q9UKS7 526 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 H3BML4 177 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 TSPAN4O14817 238 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 SCRG1O75711 98 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC25A12O75746 678 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 CD3GP09693 182 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 ELK1P19419 428 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 MAP3K8P41279 467 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 PPP3R1P63098 170 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 TNK1Q13470 666 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 STK11Q15831 433 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 NR4A3Q92570 626 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 C12orf4Q9NQ89 552 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF224Q9NZL3 707 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 TMEM5Q9Y2B1 443 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A0A6YYJ9 748 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 HIST1H2ABP04908 130 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 CXCL3P19876 107 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 EVX1P49640 407 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 FBXW4P57775 412 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 BIKQ13323 160 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 PON3Q15166 354 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 HIST3H2AQ7L7L0 130 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 JAZF1Q86VZ6 243 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 GRAMD2AQ8IUY3 354 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 RNF113BQ8IZP6 322 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 HIST1H2ACQ93077 130 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 BABAM2Q9NXR7 383 aa13.34□□□□□ -0.27
TRAFD1-201ENST00000257604 LRP4O75096 1905 aa13.33□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 A0A1B0GX78 115 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 H0YIG0 161 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 SBK2P0C263 348 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 SOX2P48431 317 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 CLDN20P56880 219 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 ZMYND11Q15326 602 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 TMPRSS11FQ6ZWK6 438 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 BRIX1Q8TDN6 353 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 DAZLQ92904 295 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 CACNA1GO43497 2377 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 G3V3Y1 287 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 FAM157BP0CG42 384 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 ATF4P18848 351 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF117Q03924 483 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 GPR176Q14439 515 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 KANSL1Q7Z3B3 1105 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 GID4Q8IVV7 300 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 ABCG5Q9H222 651 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 FGF20Q9NP95 211 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 EPHA6Q9UF33 1036 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.28
TRAFD1-201ENST00000257604 A0A1W2PQM1 296 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 TMEM129A0AVI4 362 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 HLA-DPB1P04440 258 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 TFPIP10646 304 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ABCD3P28288 659 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 CCR6P51684 374 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GPR143P51810 404 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 INPP5JQ15735 1006 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 NR2C2APQ86WQ0 139 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 SAMD12Q8N8I0 201 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 OR11H4Q8NGC9 324 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF431Q8TF32 576 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GUCD1Q96NT3 240 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms