RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 HBMQ6B0K9 141 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 FAM131AQ6UXB0 335 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 BMPERQ8N8U9 685 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TMEM72A0PK05 275 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 PATE3B3GLJ2 98 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 GPRIN2O60269 458 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 SELENOFO60613 162 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TRIM3O75382 744 aaPredicted RBP20.73■□□□□ 0.91
HOXD9-201ENST00000249499 F13BP05160 661 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 MSX1P28360 303 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 MAP2K6P52564 334 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TP53I3Q53FA7 332 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 C1orf140Q5VVS0 124 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 SLC6A19Q695T7 634 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TRILQ7L0X0 811 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 OR8H2Q8N162 312 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 RPS4Y2Q8TD47 263 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 GHSRQ92847 366 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TTYH2Q9BSA4 534 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 MFRPQ9BY79 579 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 TAS2R5Q9NYW4 299 aa20.73■□□□□ 0.91
HOXD9-201ENST00000249499 SLC19A2O60779 497 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 GATBO75879 557 aaKnown RBP20.72■□□□□ 0.91
HOXD9-201ENST00000249499 DXOO77932 396 aaKnown RBP20.72■□□□□ 0.91
HOXD9-201ENST00000249499 AHSA1O95433 338 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 CENPAP49450 140 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 FBXW4P57775 412 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 CEACAM19Q7Z692 300 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 RFLNBQ8N5W9 214 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 OR2I1PQ8NGU4 316 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 SMAP2Q8WU79 429 aaPredicted RBP20.72■□□□□ 0.91
HOXD9-201ENST00000249499 SOSTQ9BQB4 213 aa20.72■□□□□ 0.91
HOXD9-201ENST00000249499 ZNF346Q9UL40 294 aaKnown RBP20.72■□□□□ 0.91
HOXD9-201ENST00000249499 TRAV1-2A0A0B4J238 106 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 ETV2O00321 342 aaPredicted RBP20.71■□□□□ 0.91
HOXD9-201ENST00000249499 SEC14L5O43304 696 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 IGHMP01871 453 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 APOBEC1P41238 236 aaKnown RBP20.71■□□□□ 0.91
HOXD9-201ENST00000249499 GDI2P50395 445 aaKnown RBP20.71■□□□□ 0.91
HOXD9-201ENST00000249499 HCCSP53701 268 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 CAV3P56539 151 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 RIN1Q13671 783 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 MFSD13AQ14CX5 517 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 ACSM3Q53FZ2 586 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 ZNF684Q5T5D7 378 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 EEF1A1P5Q5VTE0 462 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 SLC22A8Q8TCC7 542 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 NEURL2Q9BR09 285 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 INIPQ9NRY2 104 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 COPS3Q9UNS2 423 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 PCDHGB2Q9Y5G2 931 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 LOC102723996A0A087X1L8 192 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 C17orf51A8MQB3 221 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 GMFGO60234 142 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 GP1BAP07359 652 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 MC2RQ01718 297 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 TIGD4Q8IY51 512 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 RNF31Q96EP0 1072 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 SDHAF3Q9NRP4 125 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 MRPL39Q9NYK5 338 aaKnown RBP20.71■□□□□ 0.91
HOXD9-201ENST00000249499 MYOTQ9UBF9 498 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 COMMD3Q9UBI1 195 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 GNG8Q9UK08 70 aa20.71■□□□□ 0.91
HOXD9-201ENST00000249499 MUC6Q6W4X9 2439 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 IGLV3-32A0A0A0MS00 114 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 ZNF354AO60765 605 aaPredicted RBP20.7■□□□□ 0.9
HOXD9-201ENST00000249499 SERPINI2O75830 405 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 ARL6IP5O75915 188 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 DLGAP3O95886 979 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 KLK3P07288 261 aaPredicted RBP20.7■□□□□ 0.9
HOXD9-201ENST00000249499 TACSTD2P09758 323 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 IL7P13232 177 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 PRKCAP17252 672 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 ACVR1BP36896 505 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 EVX1P49640 407 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 SCN1BQ07699 218 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 LCN10Q6JVE6 187 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 POMZP3Q6PJE2 187 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 RPTNQ6XPR3 784 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 MARCH7Q9H992 704 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 C14orf119Q9NWQ9 140 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 GPN3Q9UHW5 284 aaPredicted RBP20.7■□□□□ 0.9
HOXD9-201ENST00000249499 CACNA1HO95180 2353 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 LAMA1P25391 3075 aa20.7■□□□□ 0.9
HOXD9-201ENST00000249499 SMIM30A4D0T7 59 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 HSPB2A8KAH6 182 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 XKRYO14609 159 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 ZNF883P0CG24 379 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 SHC1P29353 583 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 BLVRAP53004 296 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 RPL27P61353 136 aaKnown RBP20.69■□□□□ 0.9
HOXD9-201ENST00000249499 HSPB2Q16082 182 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 C1QL3Q5VWW1 255 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 GHDCQ8N2G8 530 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 ITPKCQ96DU7 683 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 UBL7Q96S82 380 aaPredicted RBP20.69■□□□□ 0.9
HOXD9-201ENST00000249499 GRIP1Q9Y3R0 1128 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 FKBP7Q9Y680 259 aa20.69■□□□□ 0.9
HOXD9-201ENST00000249499 TMEM14AQ9Y6G1 99 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms