RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 SELENOPP49908 381 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 CCR4P51679 360 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF684Q5T5D7 378 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 WBP2NLQ6ICG8 309 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 NLRC3Q7RTR2 1065 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 OR5AK2Q8NH90 309 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 RADILQ96JH8 1075 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 ADAD1Q96M93 576 aaKnown RBP17.08■□□□□ 0.32
CPSF3-201ENST00000238112 TSSK2Q96PF2 358 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 OR5V1Q9UGF6 321 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 FOXJ3Q9UPW0 622 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 COL4A2P08572 1712 aa17.08■□□□□ 0.32
CPSF3-201ENST00000238112 C4orf47A7E2U8 309 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ARPC1BO15143 372 aaKnown RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 IFNA16P05015 189 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CD14P08571 375 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CALCBP10092 127 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 PNMTP11086 282 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CTSEP14091 401 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 HPGDP15428 266 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 MAOAP21397 527 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 PBX2P40425 430 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 PTH2RP49190 550 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 SLC25A1P53007 311 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 IGLV3-21P80748 117 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 MRPS10P82664 201 aaKnown RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 Q499Y3 187 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ALG10Q5BKT4 473 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 TOR2AQ5JU69 321 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 C9orf50Q5SZB4 431 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 PWWP2BQ6NUJ5 590 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 FRMD1Q8N878 549 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 LSM14AQ8ND56 463 aaKnown RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 TAS2R10Q9NYW0 307 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 MOKQ9UQ07 419 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 HIF3AQ9Y2N7 669 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 A0A1B0GUH1 482 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 TCRBV21S2A2A0A5A6 115 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 BLACEA4D250 179 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 SEMA4FO95754 770 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ART1P52961 327 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 BLVRAP53004 296 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 AP2S1P53680 142 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CTXN1P60606 82 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF74Q16587 644 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 PRTGQ2VWP7 1150 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 KLHL26Q53HC5 615 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 SLC25A25Q6KCM7 469 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 STAC2Q6ZMT1 411 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 Q6ZTK2 550 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 FAM71CQ8NEG0 241 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF578Q96N58 590 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 CCNL2Q96S94 520 aaPredicted RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 GLTPQ9NZD2 209 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF346Q9UL40 294 aaKnown RBP17.07■□□□□ 0.32
CPSF3-201ENST00000238112 SLC6A5Q9Y345 797 aa17.07■□□□□ 0.32
CPSF3-201ENST00000238112 MEN1O00255 615 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 REV3LO60673 3130 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 SOX2P48431 317 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 IKZF1Q13422 519 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 ALKBH1Q13686 389 aaKnown RBP17.06■□□□□ 0.32
CPSF3-201ENST00000238112 EXOSC2Q13868 293 aaKnown RBP17.06■□□□□ 0.32
CPSF3-201ENST00000238112 LIPNQ5VXI9 398 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 TMEM184AQ6ZMB5 413 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 OR6V1Q8N148 313 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 FTMTQ8N4E7 242 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 ADAMTS18Q8TE60 1221 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 RNF166Q96A37 237 aaPredicted RBP17.06■□□□□ 0.32
CPSF3-201ENST00000238112 HAVCR1Q96D42 359 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 NOX3Q9HBY0 568 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 UBQLN2Q9UHD9 624 aa17.06■□□□□ 0.32
CPSF3-201ENST00000238112 A0A087WV48 116 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 ACOT7O00154 380 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 CDK2P24941 298 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 SDHAP31040 664 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 P2RX1P51575 399 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 FUT7Q11130 342 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 C1orf61Q13536 156 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 POU4F3Q15319 338 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 GPR139Q6DWJ6 353 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 FAM122BQ7Z309 247 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 C15orf40Q8WUR7 153 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 MAP6Q96JE9 813 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 MOGAT1Q96PD6 335 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 MRM2Q9UI43 246 aaKnown RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 KLHDC2Q9Y2U9 406 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 ETV7Q9Y603 341 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 ANKRD20A5PA0PJZ0 165 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 PRAMEF26H0Y7S4 382 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 UPK3AO75631 287 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 APEHP13798 732 aaKnown RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 EIF2B5Q13144 721 aaKnown RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 OLFML2AQ68BL7 652 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 ATG4DQ86TL0 474 aaPredicted RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 PHOSPHO1Q8TCT1 267 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms