RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CPMP14384 443 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 BDKRB2P30411 391 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 POU3F4P49335 361 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 LIMK1P53667 647 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 CTXN1P60606 82 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 BAMBIQ13145 260 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
PRDM4-201ENST00000228437 DPY19L4Q7Z388 723 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 OR2W3Q7Z3T1 314 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.38□□□□□ -0.27
PRDM4-201ENST00000228437 MOAP1Q96BY2 351 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 DTD2Q96FN9 168 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 RBM18Q96H35 190 aaKnown RBP13.38□□□□□ -0.27
PRDM4-201ENST00000228437 CMC2Q9NRP2 79 aa13.38□□□□□ -0.27
PRDM4-201ENST00000228437 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
PRDM4-201ENST00000228437 CENPVL1A0A0U1RR11 272 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 IMPA2O14732 288 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ZNF254O75437 659 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SERPINA5P05154 406 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SPP1P10451 314 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 AVPR2P30518 371 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 DUSP2Q05923 314 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 C2orf68Q2NKX9 166 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 OR5M9Q8NGP3 310 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SMIM19Q96E16 107 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 TRIM2Q9C040 744 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 MRPS23Q9Y3D9 190 aaKnown RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 PLEKHM1Q9Y4G2 1056 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CHD5Q8TDI0 1954 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 PLPP2O43688 288 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 PAPLNO95428 1278 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ADRB3P13945 408 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CNR1P21554 472 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 BCL6P41182 706 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ENPP2Q13822 863 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 RAB33AQ14088 237 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 NKAPLQ5M9Q1 402 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 OR7G2Q8NG99 324 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 IL21RQ9HBE5 538 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SEC14L5O43304 696 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ZNF208O43345 1280 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 FABP1P07148 127 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CSF1P09603 554 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 NFYBP25208 207 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 RAB11BQ15907 218 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 DCST2Q5T1A1 773 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 FAM122BQ7Z309 247 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 LNX2Q8N448 690 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 NR4A3Q92570 626 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 Q96M85 177 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ELF4Q99607 663 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 STARD5Q9NSY2 213 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ZNF85Q03923 595 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ZNF660Q6AZW8 331 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 PRSS58Q8IYP2 241 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 METTL27Q8N6F8 245 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 OR14C36Q8NHC7 312 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 PPP1R1CQ8WVI7 109 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 MRPS24Q96EL2 167 aaKnown RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 GPER1Q99527 375 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 CHMP1AQ9HD42 196 aaPredicted RBP13.37□□□□□ -0.27
PRDM4-201ENST00000228437 ICKQ9UPZ9 632 aa13.37□□□□□ -0.27
PRDM4-201ENST00000228437 A0A1B0GWA3 101 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 PLSCR5A0PG75 271 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 RAB40ALP0C0E4 278 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 H2BFSP57053 126 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 SHC2P98077 582 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 POU4F2Q12837 409 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 IL17RCQ8NAC3 791 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 RAB40AQ8WXH6 277 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 TAS2R8Q9NYW2 309 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 OR5V1Q9UGF6 321 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 CA5BQ9Y2D0 317 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 DICER1Q9UPY3 1922 aaKnown RBP13.36□□□□□ -0.27
PRDM4-201ENST00000228437 SOD2P04179 222 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 RNLSQ5VYX0 342 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 RGCCQ9H4X1 137 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 SPHK1Q9NYA1 384 aa13.36□□□□□ -0.27
PRDM4-201ENST00000228437 GRHPRQ9UBQ7 328 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms