RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GLB1P16278 677 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 GRK6P43250 576 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 ARL4DP49703 201 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 DIO1P49895 249 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 P2RX3P56373 397 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 DYRK1AQ13627 763 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 KLF9Q13886 244 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-201ENST00000221922 TTLL10Q6ZVT0 673 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 TMEM151BQ8IW70 566 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 SLC35F3Q8IY50 421 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 ANGPTL6Q8NI99 470 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 TTTY10Q9BZA0 68 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 DIABLOQ9NR28 239 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 ADAM18Q9Y3Q7 739 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 SOX1O00570 391 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-201ENST00000221922 OR3A3P47888 321 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 CFHR1Q03591 330 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 SKP2Q13309 424 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 IL10RAQ13651 578 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 SLC22A10Q63ZE4 541 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 BTN2A1Q7KYR7 527 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 SLC25A45Q8N413 288 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 D2HGDHQ8N465 521 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 NPEPL1Q8NDH3 523 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 PHOSPHO1Q8TCT1 267 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 ZNF431Q8TF32 576 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-201ENST00000221922 DDOQ99489 341 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 B3GNT2Q9NY97 397 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 RABL2AQ9UBK7 228 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-201ENST00000221922 TEKT2Q9UIF3 430 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 MGAT4AQ9UM21 535 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 RABL2BQ9UNT1 228 aa20.22■□□□□ 0.83
CCDC9-201ENST00000221922 PCDHGA9Q9Y5G4 932 aaKnown RBP20.22■□□□□ 0.83
CCDC9-201ENST00000221922 MPDZO75970 2070 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 TRBV2A0A0J9YWF9 115 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 FRG2CA6NGY1 282 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 GSG1Q2KHT4 349 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 ZBTB37Q5TC79 503 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 ATG4DQ86TL0 474 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-201ENST00000221922 SNX33Q8WV41 574 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 SMIM4Q8WVI0 70 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 LIPHQ8WWY8 451 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 HGDQ93099 445 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 OR14A2Q96R54 314 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 LMF1Q96S06 567 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 NCDNQ9UBB6 729 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 ZNF222Q9UK12 451 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 MRPS7Q9Y2R9 242 aaKnown RBP20.21■□□□□ 0.83
CCDC9-201ENST00000221922 SLC6A5Q9Y345 797 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 NUP210LQ5VU65 1888 aa20.21■□□□□ 0.83
CCDC9-201ENST00000221922 IGKV1D-42A0A075B6H8 117 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 IGKV3D-11A0A0A0MRZ8 115 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 A0A1B0GTQ1 180 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 TRABD2BA6NFA1 517 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF264O43296 627 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 UTS2O95399 124 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ANKRD34CP0C6C1 535 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 LCN1P31025 176 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 NAA10P41227 235 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 HSF2Q03933 536 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 UBE2NLQ5JXB2 153 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 GATSQ8NAP1 163 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 OR51L1Q8NGJ5 315 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 RPS4Y2Q8TD47 263 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CLIP3Q96DZ5 547 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 LCORQ96JN0 433 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 SLC41A2Q96JW4 573 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 NMNAT2Q9BZQ4 307 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 NXF5Q9H1B4 397 aaKnown RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 GNG8Q9UK08 70 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ELF5Q9UKW6 265 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 AK6Q9Y3D8 172 aaKnown RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 COL5A1P20908 1838 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-201ENST00000221922 A0A1B0GVT2 93 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 GPRIN2O60269 458 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 H2AFB2P0C5Z0 115 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 GIMD1P0DJR0 217 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CXCL3P19876 107 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CSF2RBP32927 897 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CCR4P51679 360 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CCR6P51684 374 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 PER3P56645 1201 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CD226Q15762 336 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ESPNLQ6ZVH7 1005 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 PRSS42Q7Z5A4 293 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 OR1L3Q8NH93 324 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ZNRF4Q8WWF5 429 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 CITED4Q96RK1 184 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 NMNAT3Q96T66 252 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 OR8D2Q9GZM6 311 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ACTR6Q9GZN1 396 aa20.2■□□□□ 0.82
CCDC9-201ENST00000221922 ZNF879B4DU55 563 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 APEHP13798 732 aaKnown RBP20.19■□□□□ 0.82
CCDC9-201ENST00000221922 SPI1P17947 270 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 EDNRAP25101 427 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 OR1D4P47884 311 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 DCAF7P61962 342 aa20.19■□□□□ 0.82
CCDC9-201ENST00000221922 SNTB2Q13425 540 aaKnown RBP20.19■□□□□ 0.82
CCDC9-201ENST00000221922 RNASE12Q5GAN4 147 aaKnown RBP20.19■□□□□ 0.82
CCDC9-201ENST00000221922 CDH24Q86UP0 819 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms