RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PPP3R1P63098 170 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 SIRPAP78324 504 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 CDK5R1Q15078 307 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 ZNF79Q15937 498 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 GLYR1Q49A26 553 aaPredicted RBP26.87■■□□□ 1.89
PABPN1-201ENST00000216727 SLC16A9Q7RTY1 509 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 ZNF554Q86TJ5 538 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 THAP4Q8WY91 577 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 GHSRQ92847 366 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 SLC25A36Q96CQ1 311 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 SMIM19Q96E16 107 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 TSSK2Q96PF2 358 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 RNF32Q9H0A6 362 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 GRIP1Q9Y3R0 1128 aa26.87■■□□□ 1.89
PABPN1-201ENST00000216727 VPS13AQ96RL7 3174 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 TNFSF12-TNFSF13A0A0A6YY99 330 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 RENP00797 406 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 ACP1P24666 158 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 ACVR1BP36896 505 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 LPAL2Q16609 132 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 OR5M10Q6IEU7 315 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 RPL22L1Q6P5R6 122 aaKnown RBP26.86■■□□□ 1.89
PABPN1-201ENST00000216727 DBX2Q6ZNG2 339 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 EGFL6Q8IUX8 553 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 TEX19Q8NA77 164 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 SLC22A8Q8TCC7 542 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 ATOH1Q92858 354 aaPredicted RBP26.86■■□□□ 1.89
PABPN1-201ENST00000216727 SRRQ9GZT4 340 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 GALNT9Q9HCQ5 603 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 INIPQ9NRY2 104 aa26.86■■□□□ 1.89
PABPN1-201ENST00000216727 B4DXG7 233 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 AHSA1O95433 338 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 LDOC1O95751 146 aaPredicted RBP26.85■■□□□ 1.89
PABPN1-201ENST00000216727 DEFA1P59665 94 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 DEFA3P59666 94 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 LYPD4Q6UWN0 246 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 ELP5Q8TE02 316 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 DIRAS2Q96HU8 199 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 TTTY10Q9BZA0 68 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 SERPINA3P01011 423 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 FBXO45P0C2W1 286 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 APOBEC1P41238 236 aaKnown RBP26.85■■□□□ 1.89
PABPN1-201ENST00000216727 FAM199XQ6PEV8 388 aaPredicted RBP26.85■■□□□ 1.89
PABPN1-201ENST00000216727 FAM198BQ6UWH4 519 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 CEACAM19Q7Z692 300 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 NLGN4YQ8NFZ3 816 aaPredicted RBP26.85■■□□□ 1.89
PABPN1-201ENST00000216727 SNX18Q96RF0 628 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 DEFB126Q9BYW3 111 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 PPIL3Q9H2H8 161 aaKnown RBP26.85■■□□□ 1.89
PABPN1-201ENST00000216727 SMOC1Q9H4F8 434 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 GNG8Q9UK08 70 aa26.85■■□□□ 1.89
PABPN1-201ENST00000216727 FAM171A2A8MVW0 826 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 ETV2O00321 342 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-201ENST00000216727 MAGEB4O15481 346 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-201ENST00000216727 NCR1O76036 304 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 MSX1P28360 303 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 GRPRP30550 384 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 PCOLCEQ15113 449 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 EEF1A1P5Q5VTE0 462 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 ZNF517Q6ZMY9 492 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-201ENST00000216727 TPRA1Q86W33 373 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 TIGD4Q8IY51 512 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 ZNF511Q8NB15 262 aa26.84■■□□□ 1.89
PABPN1-201ENST00000216727 SNRNP27Q8WVK2 155 aaKnown RBP26.84■■□□□ 1.89
PABPN1-201ENST00000216727 SRA1Q9HD15 236 aaKnown RBP26.84■■□□□ 1.89
PABPN1-201ENST00000216727 IGLV3-32A0A0A0MS00 114 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 C2orf72A6NCS6 295 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 DCTN6O00399 190 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 OR2J2O76002 312 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 ZNF684Q5T5D7 378 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 MZT2AQ6P582 158 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 XKRXQ6PP77 449 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 PAMR1Q6UXH9 720 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 OR6V1Q8N148 313 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 ACOT12Q8WYK0 555 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 MR1Q95460 341 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 KIAA1143Q96AT1 154 aaPredicted RBP26.83■■□□□ 1.89
PABPN1-201ENST00000216727 OR11A1Q9GZK7 315 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 MRPL39Q9NYK5 338 aaKnown RBP26.83■■□□□ 1.89
PABPN1-201ENST00000216727 KLRF1Q9NZS2 232 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 PCDHGB2Q9Y5G2 931 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 FABP12A6NFH5 140 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 FTCDNL1E5RQL4 147 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 GDI2P50395 445 aaKnown RBP26.83■■□□□ 1.89
PABPN1-201ENST00000216727 ACSM3Q53FZ2 586 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 FAM69BQ5VUD6 431 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 ULBP3Q9BZM4 244 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 ACOXLQ9NUZ1 547 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 MED11Q9P086 117 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 COMMD3Q9UBI1 195 aa26.83■■□□□ 1.89
PABPN1-201ENST00000216727 C9J4A7 227 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 C11orf98E9PRG8 122 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 TRIM3O75382 744 aaPredicted RBP26.82■■□□□ 1.88
PABPN1-201ENST00000216727 SP9P0CG40 484 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 SHC1P29353 583 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 CCKBRP32239 447 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 MPLP40238 635 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 RPL27P61353 136 aaKnown RBP26.82■■□□□ 1.88
PABPN1-201ENST00000216727 NTRK2Q16620 822 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 AGAP7PQ5VUJ5 663 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms