RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 HOXC8P31273 242 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 PPIAP62937 165 aaKnown RBP13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ZNF615Q8N8J6 731 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 OR1J2Q8NGS2 313 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 GLYATL2Q8WU03 294 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 CPEB1Q9BZB8 566 aaKnown RBP13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 GAREM1Q9H706 876 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 TAS2R8Q9NYW2 309 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 NCDNQ9UBB6 729 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 MYOFQ9NZM1 2061 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 OR6C76A6NM76 312 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 GRXCR1A8MXD5 290 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 LEFTY2O00292 366 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ZFPL1O95159 310 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 CYB5AP00167 134 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 GAAP10253 952 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 CD53P19397 219 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 DDX6P26196 483 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDZD4-201ENST00000164640 PBX2P40425 430 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 EIF2S3LQ2VIR3 472 aaKnown RBP13.84□□□□□ -0.19
PDZD4-201ENST00000164640 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 HAVCR1Q96D42 359 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 KXD1Q9BQD3 176 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ST6GALNAC2Q9UJ37 374 aa13.84□□□□□ -0.19
PDZD4-201ENST00000164640 ZNF346Q9UL40 294 aaKnown RBP13.84□□□□□ -0.19
PDZD4-201ENST00000164640 A0A087WV48 116 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TMEM72A0PK05 275 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TVP23AA6NH52 213 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 BHLHE40O14503 412 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ELNP15502 786 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 MPGP29372 298 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ATP1B3P54709 279 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 POU4F2Q12837 409 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 PLEKHN1Q494U1 663 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 C9orf152Q5JTZ5 239 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 NKAPLQ5M9Q1 402 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TMEM106AQ96A25 262 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 SLC6A7Q99884 636 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 RSRP1Q9BUV0 290 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 DHCR7Q9UBM7 475 aaKnown RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 HS3ST2Q9Y278 367 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 WDR90Q96KV7 1748 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TRBV23OR9-2A0A075B6M9 112 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ADAM11O75078 769 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 SNRNP70P08621 437 aaKnown RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 OR2T7P0C7T2 308 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 HIST1H1TP22492 207 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 PRKAR1BP31321 381 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 NR0B1P51843 470 aaKnown RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 FXYD6P3P58550 94 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 OR2B8PP59922 312 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 EIF2B1Q14232 305 aaKnown RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 CST9Q5W186 159 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 STAC2Q6ZMT1 411 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 OR2T27Q8NH04 317 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 OR6S1Q8NH40 331 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 MOAP1Q96BY2 351 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 WDR13Q9H1Z4 485 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 GSN-AS1Q9NRJ2 163 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ZNF337Q9Y3M9 751 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 OTOFQ9HC10 1997 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 GGT3PA6NGU5 568 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 IMPA2O14732 288 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 CXCL14O95715 111 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ACAA1P09110 424 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 CCKBRP32239 447 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 RBM34P42696 430 aaKnown RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 METAP1P53582 386 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 FABP9Q0Z7S8 132 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 PLA2G7Q13093 441 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 CDNFQ49AH0 187 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ARHGAP11AQ6P4F7 1023 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TMEM205Q6UW68 189 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 WDR88Q6ZMY6 472 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 RNF180Q86T96 592 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 ZNF761Q86XN6 746 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 KISS1RQ969F8 398 aaPredicted RBP13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TSSK2Q96PF2 358 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TIMP4Q99727 224 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 COMMD4Q9H0A8 199 aa13.83□□□□□ -0.2
PDZD4-201ENST00000164640 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 PCDH8O95206 1070 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 CD2P06729 351 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 CPT2P23786 658 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 ZNF805Q5CZA5 627 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 FOXN4Q96NZ1 517 aa13.82□□□□□ -0.2
PDZD4-201ENST00000164640 OR6C65A6NJZ3 312 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms