RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DCDP81605 110 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 LTBQ06643 244 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SELENBP1Q13228 472 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TOMM34Q15785 309 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SGCBQ16585 318 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 MESTQ5EB52 335 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PLET1Q6UQ28 207 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TRILQ7L0X0 811 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 KCTD20Q7Z5Y7 419 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 NR2C2APQ86WQ0 139 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 UBQLNLQ8IYU4 475 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 OR6N2Q8NGY6 317 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ZNRF4Q8WWF5 429 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SLC25A36Q96CQ1 311 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 OR14A2Q96R54 314 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 RTN4RQ9BZR6 473 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 HDHD2Q9H0R4 259 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PPIL3Q9H2H8 161 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 CYSLTR2Q9NS75 346 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ABRACLQ9P1F3 81 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 LAMP5Q9UJQ1 280 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF221Q9UK13 617 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TMED7Q9Y3B3 224 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TMEM14AQ9Y6G1 99 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TMEM72A0PK05 275 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 A8MVM7 634 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 C11orf98E9PRG8 122 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 H7C1C5 153 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 AGRPO00253 132 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PDCD5O14737 125 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PHYHO14832 338 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ARHGEF9O43307 516 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 LYRM1O43325 122 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SIGLEC6O43699 453 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 FADS1O60427 444 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ITGA10O75578 1167 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 UCHL1P09936 223 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 NPR2P20594 1047 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 HOXA6P31267 233 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PSMB10P40306 273 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 LCN6P62502 163 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SQSTM1Q13501 440 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SF3A2Q15428 464 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 YIF1BQ5BJH7 314 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PAPD4Q6PIY7 484 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ANKRD37Q7Z713 158 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 YIPF7Q8N8F6 280 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 NUBPLQ8TB37 319 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ADAD1Q96M93 576 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 KLHL15Q96M94 604 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 FRMD6Q96NE9 622 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TSSK2Q96PF2 358 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PDCD1LG2Q9BQ51 273 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 MMP28Q9H239 520 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 RNF121Q9H920 327 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 SRA1Q9HD15 236 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 B3GAT2Q9NPZ5 323 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 INIPQ9NRY2 104 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 RBFOX1Q9NWB1 397 aaKnown RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 C19orf25Q9UFG5 118 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 IKZF2Q9UKS7 526 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF281Q9Y2X9 895 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 A0A0G2JK05 382 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 TRBV11-1A0A0K0K1C0 115 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 FAM240BA0A1B0GVZ2 78 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 MEIOCA2RUB1 952 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PSMD9O00233 223 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 OR2T1O43869 369 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 CFIP05156 583 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 EIF4EP06730 217 aaKnown RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 TRAPPC2P0DI81 140 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 TRAPPC2BP0DI82 140 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PSKH1P11801 424 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 IMPDH2P12268 514 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 AHCYP23526 432 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 MAPK3P27361 379 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 THBS2P35442 1172 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PITPNBP48739 271 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 EMP2P54851 167 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SUMO3P55854 103 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 CCL7P80098 99 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 COL28A1Q2UY09 1125 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 C1orf140Q5VVS0 124 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PYHIN1Q6K0P9 492 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF574Q6ZN55 896 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 OVCH1Q7RTY7 1134 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 KANSL1Q7Z3B3 1105 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 TMPRSS9Q7Z410 1059 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PPP1R3BQ86XI6 285 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 EGFL6Q8IUX8 553 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 RDH10Q8IZV5 341 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 UBE2J2Q8N2K1 259 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 EXD3Q8N9H8 876 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SCAIQ8N9R8 606 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 OR5L2Q8NGL0 311 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF671Q8TAW3 534 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms