RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MPC2O95563 127 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 PDGFAP04085 211 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 ZNF141Q15928 474 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 ELOA3BQ3SY89 546 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 ARHGAP11AQ6P4F7 1023 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 IDO2Q6ZQW0 420 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 KANSL1Q7Z3B3 1105 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GRAMD2AQ8IUY3 354 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 ELOA3Q8NG57 546 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 AHCYL2Q96HN2 611 aaKnown RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 HSPA12BQ96MM6 686 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GPR137Q96N19 417 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 CLEC4MQ9H2X3 399 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 POLE3Q9NRF9 147 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GPR27Q9NS67 375 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 FBXL21Q9UKT6 434 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 PLCL2Q9UPR0 1127 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 TRABD2BA6NFA1 517 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 RHPN2P1A8MT19 583 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GATBO75879 557 aaKnown RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 RPP14O95059 124 aaKnown RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 WISP1O95388 367 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 ZP2Q05996 745 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 PON3Q15166 354 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 TMEM255AQ5JRV8 349 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GKN2Q86XP6 184 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 PTPMT1Q8WUK0 201 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 PELI1Q96FA3 418 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 WDR89Q96FK6 387 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 PGLYRP3Q96LB9 341 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 FOXN4Q96NZ1 517 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 UBL7Q96S82 380 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 ELF5Q9UKW6 265 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 RCE1Q9Y256 329 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 NUBP2Q9Y5Y2 271 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 WDFY4Q6ZS81 3184 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 A0A087WUJ7 227 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ACOD1A6NK06 481 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ZNF593O00488 134 aaPredicted RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 PLPP2O43688 288 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 NME1P15531 152 aaKnown RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 ARL4DP49703 201 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 GDI2P50395 445 aaKnown RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 SNTA1Q13424 505 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 GSG1Q2KHT4 349 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 FTMTQ8N4E7 242 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 FKRPQ9H9S5 495 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 TRBV2A0A0J9YWF9 115 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 NUDT14O95848 222 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 IGLV3-19P01714 112 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 EDNRAP25101 427 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 GDNFP39905 211 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 FASLGP48023 281 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 VEGFCP49767 419 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 SKP1P63208 163 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 FUT7Q11130 342 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ODF4Q2M2E3 257 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 LEG1Q6P5S2 330 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 Q6ZTK2 550 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 CDH24Q86UP0 819 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 SLC35F2Q8IXU6 374 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ZNF563Q8TA94 476 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 HOXB13Q92826 284 aaPredicted RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 CNN2Q99439 309 aaKnown RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 MESP1Q9BRJ9 268 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 SEC22CQ9BRL7 303 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 HEXA-AS1Q9H8Q6 139 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 IGKV1D-42A0A075B6H8 117 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 SHOXO15266 292 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 FLRT2O43155 660 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 GPANK1O95872 356 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 CLPSP04118 112 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 EPXP11678 715 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 ITPKBP27987 946 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 RBM34P42696 430 aaKnown RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 GABRA4P48169 554 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 GPR143P51810 404 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 EFNA3P52797 238 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 AP2S1P53680 142 aaPredicted RBP11.97□□□□□ -0.49
CTNS-201ENST00000046640 CAMK2DQ13557 499 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 HYAL4Q2M3T9 481 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 SLC25A25Q6KCM7 469 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 TDHQ8IZJ6 230 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 JAM3Q9BX67 310 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 EMC7Q9NPA0 242 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
CTNS-201ENST00000046640 C7orf66A4D0T2 115 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 TVP23AA6NH52 213 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 C10orf142B7Z368 130 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 TPOP07202 933 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 CD27P26842 260 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 CDKN2AP42771 156 aaKnown RBP11.96□□□□□ -0.49
CTNS-201ENST00000046640 HSD17B7P56937 341 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 TOMM34Q15785 309 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms