RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 WNT7BP56706 349 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CTXN1P60606 82 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF85Q03923 595 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ASAH1Q13510 395 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SFT2D3Q587I9 215 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 LYSMD2Q8IV50 215 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 RBMXL3Q8N7X1 1067 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ARSGQ96EG1 525 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TIMD4Q96H15 378 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 HBEGFQ99075 208 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 WDR77Q9BQA1 342 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 GSX2Q9BZM3 304 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SIX2Q9NPC8 291 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 V9GYS6 101 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM150BA6NC51 233 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 NKX6-3A6NJ46 265 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 B4DGG1 531 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SDHDO14521 159 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 LCATP04180 440 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 MAS1P04201 325 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CXADRP78310 365 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ATXN7L3Q14CW9 347 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 OR5K2Q8NHB8 316 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GPR62Q9BZJ7 368 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 NSG2Q9Y328 171 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SCN7AQ01118 1682 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CD8B2A6NJW9 211 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF264O43296 627 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ALPLP05186 524 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CD8BP10966 210 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GABRB3P28472 473 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GRPRP30550 384 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GDI1P31150 447 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 IL2RGP31785 369 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ZBTB46Q86UZ6 589 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SLC38A6Q8IZM9 456 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SEH1LQ96EE3 360 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SLC25A44Q96H78 314 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PCYT2Q99447 389 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 RAB18Q9NP72 206 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 EHFQ9NZC4 300 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 OR52A1Q9UKL2 312 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 OR6C76A6NM76 312 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 AP1G1O43747 822 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SIX3O95343 332 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 DOC2BQ14184 412 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM183BQ1AE95 376 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 RNLSQ5VYX0 342 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM19Q96HH6 336 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 DHRS4Q9BTZ2 278 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ARV1Q9H2C2 271 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 AK6Q9Y3D8 172 aaKnown RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 FAM183AA6NL82 134 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ENPP3O14638 875 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 SMIM17P0DL12 118 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 RPS24P62847 133 aaKnown RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PNRC1Q12796 327 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GPR18Q14330 331 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 LGI3Q8N145 548 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 DCBLD1Q8N8Z6 715 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM190Q8WZ59 177 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GTF2H4Q92759 462 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 DIO2Q92813 273 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 MVB12AQ96EY5 273 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PTPN18Q99952 460 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM165Q9HC07 324 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CD84Q9UIB8 345 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 EML5Q05BV3 1969 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 COL16A1Q07092 1604 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 A0A087WZY1 265 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF705GA8MUZ8 300 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GFRA2O00451 464 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 B4GALT2O60909 372 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 KLRK1P26718 216 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PIGAP37287 484 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 AQP2P41181 271 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ID4P47928 161 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CDC20Q12834 499 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 ECM1Q16610 540 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 TMUB2Q71RG4 321 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GPR26Q8NDV2 337 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 NLGN4YQ8NFZ3 816 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CNIH3Q8TBE1 160 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GIMAP1Q8WWP7 306 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 YIPF5Q969M3 257 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 RTL8AQ9BWD3 113 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CXXC1Q9P0U4 656 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-201ENST00000011700 NDRG3Q9UGV2 375 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 GLTPD2A6NH11 291 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 CFHP08603 1231 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 DDOSTP39656 456 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 LMAN2Q12907 356 aa5.66□□□□□ -1.5
VPS13D-201ENST00000011700 PNLIPRP3Q17RR3 467 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms