RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Slc22a22Q8R0S9 554 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Tubg2Q8VCK3 451 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ak6Q8VCP8 172 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr812Q8VG64 310 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Zc3h8Q9JJ48 305 aaKnown RBP14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Eci2Q9WUR2 391 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm8127E9Q0P0 100 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm8094K7N6U8 211 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Lrfn1Q2WF71 766 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 BC030870Q3V2G4 71 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Hspb6Q5EBG6 162 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fam124bQ8BLQ0 456 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cdca4Q9CWM2 237 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Slc38a3Q9DCP2 505 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Vmn1r10W4VSP8 311 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Btbd35f21A0A140T8Q5 498 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr1366A0A1W2P740 328 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 G430095P16RikE9Q913 147 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Btbd35f22J3QN64 498 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Vmn2r95L7N274 845 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 CtsaP16675 474 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Pax4P32115 349 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fgf11P70378 225 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 NptnP97300 397 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 B4galnt1Q09200 533 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Slc5a6Q5U4D8 634 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Med16Q6PGF3 828 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Siglec5Q920G3 569 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Q99K99 313 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Plekhj1Q9D240 164 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Spaca7Q9D2S4 182 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Entpd4Q9DBT4 613 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Praf2Q9JIG8 178 aa14.53□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm2056J3QQ02 144 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Sh2d1bO35324 132 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Wisp1O54775 367 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gon7P0C8B4 98 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Egfbp2P36368 261 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fgf9P54130 208 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm732Q3V0P9 516 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Adgrg7Q8BM96 785 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Dync2li1Q8K0T2 351 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Lsm14aQ8K2F8 462 aaKnown RBP14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Syngr3Q8R191 229 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Rfpl4aQ8VH31 287 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Med18Q9CZ82 208 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Med8Q9D7W5 268 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Lrrc51Q9DAK8 192 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 ClcnkaQ9WUB7 687 aa14.52□□□□□ -0.08
Trim39-203ENSMUST00000113706 Scn2aA0A0J9YTW6 2006 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Olfr1025-ps1A0A140T8K3 312 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Gm11397F6V5V4 377 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Arg2O08691 354 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 MpoP11247 718 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 DbiP31786 87 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Dnaaf3Q3UYV8 586 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Gcnt7Q3V3K7 433 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Kng2Q6S9I3 644 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Eid2Q6X7S9 236 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Ldoc1Q7TPY9 151 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Serpinb9fQ80UK5 377 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 QpctlQ8BH73 383 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Noxa1Q8CJ00 444 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Abhd17cQ8VCV1 320 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Grk5Q8VEB1 590 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Tmed9Q99KF1 235 aaKnown RBP14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Il21Q9ES17 146 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Aldh9a1Q9JLJ2 494 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 MioxQ9QXN5 285 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Opn4Q9QXZ9 521 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Dok3Q9QZK7 444 aa14.52□□□□□ -0.09
Trim39-203ENSMUST00000113706 Angpt1O08538 498 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 GalP47212 124 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 TesP47226 423 aaKnown RBP14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Ackr3P56485 362 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 FrzbP97401 323 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Laptm5Q61168 261 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Bcap31Q61335 245 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Ptp4a1Q63739 173 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Tmem158Q6F5E0 286 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 St8sia6Q8K4T1 398 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Glyr1Q922P9 546 aaKnown RBP14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 NaxdQ9CZ42 343 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Fam69aQ9D6I7 428 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Lancl2Q9JJK2 450 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Slc39a1Q9QZ03 324 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Dctn3Q9Z0Y1 186 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Cbx3P23198 183 aaKnown RBP14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Copz1P61924 177 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Hapln3Q80WM5 359 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Atp5f1Q9CQQ7 256 aaKnown RBP14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Mdm1Q9D067 708 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Dimt1Q9D0D4 313 aaKnown RBP14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Ceacam20Q9D2Z1 577 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 ClnkQ9QZE2 435 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Nfkb2Q9WTK5 899 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Il18bpQ9Z0M9 193 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Gm45711E0CXA2 391 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Vmn2r101E9PZS9 857 aa14.51□□□□□ -0.09
Trim39-203ENSMUST00000113706 Ccdc69Q3TCJ8 202 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms