RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Abcd2Q61285 741 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Nsg1Q62092 185 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Btn1a1Q62556 524 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Mex3bQ69Z36 601 aaKnown RBP3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Tspyl5Q69ZB3 406 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ssxb3Q6XAS4 170 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ppp2r2bQ6ZWR4 443 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Olfr1231Q7TQZ8 313 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 AftphQ80WT5 931 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Supv3l1Q80YD1 779 aaKnown RBP3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 NelfaQ8BG30 530 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Atg4bQ8BGE6 393 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Mettl27Q8BGM4 238 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Sdhaf4Q8BTE0 104 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Klhl7Q8BUL5 586 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Zfp398Q8BV16 643 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ccdc134Q8C7V8 229 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Slc46a2Q8CA03 479 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ccdc63Q8CDV6 558 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Panx3Q8CEG0 392 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ccdc28aQ8CEI3 192 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Trnt1Q8K1J6 434 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 MepeQ8K4L6 441 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Olfr850Q8VFF2 315 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Tmprss11dQ8VHK8 417 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 SfpqQ8VIJ6 699 aaKnown RBP3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Sfxn3Q91V61 321 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Hrh4Q91ZY2 391 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 EsamQ925F2 394 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Cdk9Q99J95 372 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Tmem216Q9CQC4 141 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 4930553M12RikQ9CUH1 165 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Gtpbp8Q9CY28 285 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 MmachcQ9CZD0 279 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Eral1Q9CZU4 437 aaKnown RBP3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ube2v1Q9CZY3 147 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Aaed1Q9D1A0 226 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 PudpQ9D5U5 234 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Il23aQ9EQ14 196 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ppp1r1aQ9ERT9 171 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 P2ry14Q9ESG6 338 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 NpvfQ9ESQ8 188 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Lgi1Q9JIA1 557 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Cngb3Q9JJZ9 694 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 ThegQ9JMB1 375 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 ClnkQ9QZE2 435 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Ehd1Q9WVK4 534 aaKnown RBP3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Col6a5A6H584 2640 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Tenm3Q9WTS6 2715 aa3.78□□□□□ -1.8
Hmgb1-203ENSMUST00000110505 Tex15F8VPN2 2785 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Dock9Q8BIK4 2055 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ifitm6A0A1B0GS75 124 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Lrrc72A0A1Y7VMI0 288 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ccdc62E9PVD1 701 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 PtprhE9Q0N2 971 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gm7945F6QI24 236 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gm8444F6XS56 118 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gm10324L7N208 604 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Sp100O35892 482 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 P2rx6O54803 389 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 CaskO70589 926 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Stam2O88811 523 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Igh-1aP01865 398 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Il6P08505 211 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Cd5P13379 494 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Myf6P15375 242 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gabra3P26049 492 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 PrkcdP28867 674 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ptpn6P29351 595 aaKnown RBP3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gpx3P46412 226 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Hrh3P58406 445 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Rit1P70426 219 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 NeblQ0II04 452 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Tigd2Q0VBL1 525 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Zglp1Q1WG82 266 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Mrgprb2Q3KNA1 338 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Acsf3Q3URE1 583 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Tet1Q3URK3 2007 aaKnown RBP3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 GmncQ3URY2 333 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Tbc1d24Q3UUG6 561 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 E330034G19RikQ3UWX6 351 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Gm10192Q3V0S1 108 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Pydc3Q3V3Q4 588 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Sco1Q5SUC9 284 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Nbl1Q61477 178 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Hesx1Q61658 185 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Fam222bQ6P539 562 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Kng2Q6S9I3 644 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Tigd3Q7TM95 470 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ddhd2Q80Y98 699 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Mup21Q80YX8 181 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Paqr7Q80ZE4 345 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Wdr92Q8BGF3 357 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Dcaf12l2Q8BGW4 469 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Adgrg7Q8BM96 785 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Steap2Q8BWB6 489 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Acot4Q8BWN8 421 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ankrd33Q8BXP5 385 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Cpne1Q8C166 536 aa3.77□□□□□ -1.81
Hmgb1-203ENSMUST00000110505 Ska3Q8C263 411 aa3.77□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms