RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 C1orf94Q6P1W5 598 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 C5orf46Q6UWT4 87 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 NCCRP1Q6ZVX7 275 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-228ENST00000641847 TRILQ7L0X0 811 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GALNT5Q7Z7M9 940 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 SIAH3Q8IW03 269 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 CDK20Q8IZL9 346 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GALNT4Q8N4A0 578 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 C10orf53Q8N6V4 93 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 PACRGLQ8N7B6 248 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 OR13C2Q8NGS9 318 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 MAGEE2Q8TD90 523 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GNPDA2Q8TDQ7 276 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 DNAJC9Q8WXX5 260 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 MBD6Q96DN6 1003 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 KLHL15Q96M94 604 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 SLC29A1Q99808 456 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 PTDSS2Q9BVG9 487 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 OSBPL10Q9BXB5 764 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 RASSF4Q9H2L5 321 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 VCXQ9H320 206 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 LDAHQ9H6V9 325 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 EXO5Q9H790 373 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF556Q9HAH1 456 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 ACKR4Q9NPB9 350 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 NPDC1Q9NQX5 325 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-228ENST00000641847 C8orf4Q9NR00 106 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 KRT84Q9NSB2 600 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 PLEKHA6Q9Y2H5 1048 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF337Q9Y3M9 751 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 AP4B1Q9Y6B7 739 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 RTTNQ86VV8 2226 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 INTS1Q8N201 2190 aaKnown RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 A0A1W2PNR3 127 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 NKX2-6A6NCS4 301 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 SEC14L5O43304 696 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 KLF4O43474 513 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 MITFO75030 526 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 CTAG2O75638 210 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 OR7A10O76100 309 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TOXO94900 526 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 CH25HO95992 272 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 IGF2P01344 180 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 IGHG3P01860 377 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 BGLAPP02818 100 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ALPLP05186 524 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 SAGP10523 405 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 IMPDH2P12268 514 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ANXA8P13928 327 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 POU2F1P14859 743 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF26P17031 533 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 FUT1P19526 365 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 FKBP2P26885 142 aaKnown RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 GTF2E2P29084 291 aaKnown RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 PTGS2P35354 604 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 VHLP40337 213 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 PEX19P40855 299 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 STARP49675 285 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 OR7A5Q15622 319 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF74Q16587 644 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM176BQ3YBM2 270 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 FAM69AQ5T7M9 428 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 KDM4DQ6B0I6 523 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 PPP4R4Q6NUP7 873 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TMPRSS11FQ6ZWK6 438 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 GGNQ86UU5 652 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 UBQLNLQ8IYU4 475 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TAAR8Q969N4 342 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ARL5BQ96KC2 179 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 MOGAT1Q96PD6 335 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 OR5B2Q96R09 309 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 GPA33Q99795 319 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 SMR3AQ99954 134 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 POTEKPQ9BYX7 375 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 UCK2Q9BZX2 261 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 PAPOLBQ9NRJ5 636 aaKnown RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 SPRR3Q9UBC9 169 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-228ENST00000641847 POFUT2Q9Y2G5 429 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 ORC6Q9Y5N6 252 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 MPDZO75970 2070 aa8.41□□□□□ -1.06
PHGDH-228ENST00000641847 TRAV27A0A087WT01 109 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 HTR3EA5X5Y0 456 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 UNC119BA6NIH7 251 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 LIPT2A6NK58 231 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 FTCDNL1E5RQL4 147 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 H0YC42 278 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 CDC42EP2O14613 210 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TNFSF11O14788 317 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 OR2T1O43869 369 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 HCN1O60741 890 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 SOX14O95416 240 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 ACTL6AO96019 429 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 MT-ATP6P00846 226 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 TPOP07202 933 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 BMP7P18075 431 aa8.4□□□□□ -1.06
PHGDH-228ENST00000641847 GSTM3P21266 225 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms