RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	NAA11	Q9BSU3	229 aa	Predicted RBP	7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	SPRTN	Q9H040	489 aa	Predicted RBP	7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	SMOC1	Q9H4F8	434 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	ACTL8	Q9H568	366 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	MAGIX	Q9H6Y5	334 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	KIR3DX1	Q9H7L2	352 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	EXOSC4	Q9NPD3	245 aa	Known RBP	7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	ISYNA1	Q9NPH2	558 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	SLC52A3	Q9NQ40	469 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	NUDT4	Q9NZJ9	180 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	SLC9A8	Q9Y2E8	581 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	PCDHB1	Q9Y5F3	818 aa		7.34	□□□□□ -1.23
RTTN-223	ENST00000640931	ATG2B	Q96BY7	2078 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	HYKK	A2RU49	373 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	AGAP14	A8MT82	685 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	C22orf46	C9J442	243 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	LRRN3	E7EW58	273 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931		E9PQ18	207 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	SIAH2	O43255	324 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	RDH16	O75452	317 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	CA11	O75493	328 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	CYB5R3	P00387	301 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TF	P02787	698 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TCRB	P04435	133 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	HIST1H2AB	P04908	130 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ERCC1	P07992	297 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF35	P13682	527 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	PSMA1	P25786	263 aa	Known RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	AOAH	P28039	575 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	MAPK8	P45983	427 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	SELENOP	P49908	381 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	AP3S2	P59780	193 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	DLX2	Q07687	328 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	PWP1	Q13610	501 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	IL18	Q14116	193 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF234	Q14588	700 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	NKAIN1	Q4KMZ8	207 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	RFTN2	Q52LD8	501 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	XKR7	Q5GH72	579 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	VWA1	Q6PCB0	445 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	UBE2R2	Q712K3	238 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	HIST3H2A	Q7L7L0	130 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	PXK	Q7Z7A4	578 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TMEM200A	Q86VY9	491 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF573	Q86YE8	665 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	BAP18	Q8IXM2	172 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ETFBKMT	Q8IXQ9	262 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	MAML2	Q8IZL2	1156 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	HS3ST5	Q8IZT8	346 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF614	Q8N883	585 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	C19orf47	Q8N9M1	422 aa	Known RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	OR52E4	Q8NGH9	312 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	CHTF18	Q8WVB6	975 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	HIST1H2AC	Q93077	130 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	PHYHIPL	Q96FC7	376 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	C12orf66	Q96MD2	445 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TMEM74	Q96NL1	305 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ALKBH3	Q96Q83	286 aa	Predicted RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	MYADM	Q96S97	322 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	RSRP1	Q9BUV0	290 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	C1QTNF3	Q9BXJ4	246 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	CDCA4	Q9BXL8	241 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	NLN	Q9BYT8	704 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ADAM19	Q9H013	955 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	COMMD4	Q9H0A8	199 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ARL6	Q9H0F7	186 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TLNRD1	Q9H1K6	362 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	LRRN3	Q9H3W5	708 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	RCC2	Q9P258	522 aa	Known RBP	7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	ATG4B	Q9Y4P1	393 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	OARD1	Q9Y530	152 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	SLCO1B1	Q9Y6L6	691 aa		7.33	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3D	A0A087WVF3	549 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3I	A0A087WXS9	549 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3E	A0A087X179	549 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	LOC105369274	A0A096LPK9	316 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931		A0A0A6YYC8	382 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CBY3	A6NI87	242 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NKX6-3	A6NJ46	265 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3L	B9A6J9	549 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931		I3L1I5	382 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CCS	O14618	274 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TGOLN2	O43493	480 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CTAG2	O75638	210 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	AP2A2	O94973	939 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SCG5	P05408	212 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	PRR35	P0CG20	571 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	UROS	P10746	265 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ATP1B2	P14415	290 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EPHA1	P21709	976 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	DGKA	P23743	735 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OPRD1	P41143	372 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NSG1	P42857	185 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	KLF3	P57682	345 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	RPS26	P62854	115 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EIF5A	P63241	154 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SHC2	P98077	582 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EMX2	Q04743	252 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CHIT1	Q13231	466 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms